Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq23 118 2e-21 >seq23 Length=743066 Score = 118 bits (130), Expect = 2e-21 Identities = 190/268 (71%), Gaps = 4/268 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| | || || || ||||| | |||||| | |||||| Sbjct 463999 ATCTGGCAGATGTACAAGAAGGCAGAAGCATCTTTCTGGACCGCAGAAGAGATTGATCTG 463940 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | | | | ||| ||||| | ||||| || Sbjct 463939 TCAAAGGATCTACACGACTGGAACAACAGACTCAATGATGACGAGCGCTACTTTATCTCC 463880 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197 ||| || | || ||||| || | ||||| ||||| ||||| || || || |||| || Sbjct 463879 CACGTTCTCGCATTCTTCGCTGCATCCGACGGAATTGTCAATGAAAACTTGGTTGAG-CG 463821 Query 125198 ATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 |||| | || ||| | || ||||| | ||||| ||||||||||||||||||| Sbjct 463820 ATTCAGTGGTGAAGTTCAA-ATCCCAGAAGCAAGATGCTTCTACGGATTCCAAATCATGA 463762 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTC 125284 | |||||| | ||||| |||| ||||| Sbjct 463761 TGGAGAACATTCACTCTGAAACATACTC 463734 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || || ||||||||||| || || || ||||| || || || || ||||||| Sbjct 463540 CTCGTCGCTTTCGCCGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCCTCCATCTTC 463481 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || |||||| | ||||| || | ||||| | || || || Sbjct 463480 TGGCTTAAGAAGCGTGGTCTCATGGCTGGACTCACTTTCTCCAACGAACTCATCTCCCGT 463421 Query 125547 GACGAGGGCCTACACTGTGACTTTGC 125572 ||||| ||||| ||| ||||||||| Sbjct 463420 GACGAAGGCCTCCACACTGACTTTGC 463395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741051363298960