Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq11 131 4e-25
>seq11
Length=1281110
Score = 131 bits (144), Expect = 4e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427
||| || ||||| || ||||| || || |||||||| || || | || ||||| |||||
Sbjct 151703 TTCCTTTTGAATGTTGTAGTCGGAAAGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAA 151644
Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487
|| | |||||||| ||||| || || || || |||||||||||||||| || |||||
Sbjct 151643 GATCAATCTCTGTTGGTCAGGGGGGATACCCTCCTTATCCTGAATCTTTGACTTGACATT 151584
Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| | ||||| | ||| || |||| |||||| ||||| ||||| | || || ||
Sbjct 151583 ATCAATAGTATCTGACGATTCAACTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAAC 151524
Query 104548 AAATATCTGCAT 104559
||| || |||||
Sbjct 151523 AAAGATTTGCAT 151512
Score = 111 bits (122), Expect = 4e-19
Identities = 151/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
|| ||||| || | || | |||||||| ||||||||||| || || || || || | |
Sbjct 151273 AGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGA 151214
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|| || || ||||| ||||| || || || | | |||||||| || || ||||| ||
Sbjct 151213 CCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCC 151154
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
|| || |||||||| | || || || || | || || || ||| ||||| || ||
Sbjct 151153 TTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGTG 151094
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATA 104552
|| ||||| || || ||||| || |||| ||
Sbjct 151093 ATGGTCTTTCCGGTGAGTGTCTTAACAACTA 151063
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | || || ||||| | || || || || ||||| || ||||||
Sbjct 151002 ATTCCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCA 150943
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
| || | ||| || || ||||||||||| || ||||| | | |||||| || ||
Sbjct 150942 CTCAAGGTGCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGG 150883
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||| || || ||||| ||||| | || ||||| || | |||||||| | ||
Sbjct 150882 GGGATTCCCTCCTTGTCCTGGATCTTAGACTTAACATTATCAATTGTATCGCTCGACTCG 150823
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535
||||| || || || ||||| |||||
Sbjct 150822 ACCTCAAGGGTGATGGTCTTGCCAGT 150797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151385919560968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |