Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq11 131 4e-25 >seq11 Length=1281110 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427 ||| || ||||| || ||||| || || |||||||| || || | || ||||| ||||| Sbjct 151703 TTCCTTTTGAATGTTGTAGTCGGAAAGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAA 151644 Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487 || | |||||||| ||||| || || || || |||||||||||||||| || ||||| Sbjct 151643 GATCAATCTCTGTTGGTCAGGGGGGATACCCTCCTTATCCTGAATCTTTGACTTGACATT 151584 Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | ||||| | ||| || |||| |||||| ||||| ||||| | || || || Sbjct 151583 ATCAATAGTATCTGACGATTCAACTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAAC 151524 Query 104548 AAATATCTGCAT 104559 ||| || ||||| Sbjct 151523 AAAGATTTGCAT 151512 Score = 111 bits (122), Expect = 4e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || ||||| || | || | |||||||| ||||||||||| || || || || || | | Sbjct 151273 AGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGA 151214 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || ||||| ||||| || || || | | |||||||| || || ||||| || Sbjct 151213 CCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCC 151154 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || || |||||||| | || || || || | || || || ||| ||||| || || Sbjct 151153 TTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGTG 151094 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATA 104552 || ||||| || || ||||| || |||| || Sbjct 151093 ATGGTCTTTCCGGTGAGTGTCTTAACAACTA 151063 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | || || ||||| | || || || || ||||| || |||||| Sbjct 151002 ATTCCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCA 150943 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || | ||| || || ||||||||||| || ||||| | | |||||| || || Sbjct 150942 CTCAAGGTGCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGG 150883 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| || || ||||| ||||| | || ||||| || | |||||||| | || Sbjct 150882 GGGATTCCCTCCTTGTCCTGGATCTTAGACTTAACATTATCAATTGTATCGCTCGACTCG 150823 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| || || || ||||| ||||| Sbjct 150822 ACCTCAAGGGTGATGGTCTTGCCAGT 150797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151385919560968