Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq11 100 3e-16
seq27 93.3 4e-14
>seq11
Length=1281110
Score = 100 bits (110), Expect = 3e-16
Identities = 144/201 (72%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
|||||||| | ||||||||||| || | || |||||| | || || || |||||
Sbjct 151264 ACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCG--GAGAGGGTGCGACCATCCT 151207
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| || || |||||| | ||||| || | ||| ||||| || ||||| || || ||||| |
Sbjct 151206 CAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTT 151147
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
||| || | ||| ||| ||| |||||||| || || || | ||||||||| |
Sbjct 151146 GAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGTGATGGTCT 151087
Query 94977 TTCCAGTAAGAGTTTTCACAA 94997
|||| || || || || ||||
Sbjct 151086 TTCCGGTGAGTGTCTTAACAA 151066
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855
|||||||||||| || ||||||||| | ||| || ||| | |||||| | ||||
Sbjct 151721 CACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAGTCG--GAAAGTGTTCTACCATCC 151664
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|||| ||| ||||| ||||||| ||||| || || || || || ||||| || || ||
Sbjct 151663 TCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGGGGGATACCCTCCTTATCC 151604
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| ||| |||| |||||| | | ||| || | || || || | || || ||
Sbjct 151603 TGAATCTTTGACTTGACATTATCAATAGTATCTGACGATTCAACTTCTAATGTAATTGTC 151544
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| | ||| || |||||||| |||||
Sbjct 151543 TTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512
>seq27
Length=671268
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|| ||||||||||| | || || || ||||| | ||| || ||| | ||| | |
Sbjct 263813 CGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCA 263872
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| || || ||||| | ||||| |||| || || || || || || || || |||
Sbjct 263873 TCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTG 263932
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | |||||| | ||| ||||| | || || || | ||||||
Sbjct 263933 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 263992
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
||||| || ||||| || || || ||||||||||||
Sbjct 263993 GTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATG 264028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448286459320560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |