Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq11 100 3e-16 seq27 93.3 4e-14 >seq11 Length=1281110 Score = 100 bits (110), Expect = 3e-16 Identities = 144/201 (72%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||||||||||| || | || |||||| | || || || ||||| Sbjct 151264 ACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCG--GAGAGGGTGCGACCATCCT 151207 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || || |||||| | ||||| || | ||| ||||| || ||||| || || ||||| | Sbjct 151206 CAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTT 151147 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| || | ||| ||| ||| |||||||| || || || | ||||||||| | Sbjct 151146 GAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGTGATGGTCT 151087 Query 94977 TTCCAGTAAGAGTTTTCACAA 94997 |||| || || || || |||| Sbjct 151086 TTCCGGTGAGTGTCTTAACAA 151066 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 |||||||||||| || ||||||||| | ||| || ||| | |||||| | |||| Sbjct 151721 CACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAGTCG--GAAAGTGTTCTACCATCC 151664 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||| ||| ||||| ||||||| ||||| || || || || || ||||| || || || Sbjct 151663 TCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGGGGGATACCCTCCTTATCC 151604 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||| |||| |||||| | | ||| || | || || || | || || || Sbjct 151603 TGAATCTTTGACTTGACATTATCAATAGTATCTGACGATTCAACTTCTAATGTAATTGTC 151544 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| | ||| || |||||||| ||||| Sbjct 151543 TTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512 >seq27 Length=671268 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 || ||||||||||| | || || || ||||| | ||| || ||| | ||| | | Sbjct 263813 CGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCA 263872 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| || || ||||| | ||||| |||| || || || || || || || || ||| Sbjct 263873 TCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTG 263932 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || | |||||| | ||| ||||| | || || || | |||||| Sbjct 263933 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 263992 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||||| || ||||| || || || |||||||||||| Sbjct 263993 GTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATG 264028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448286459320560