Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq39 120 5e-23
seq10 100 4e-17
>seq39
Length=392941
Score = 120 bits (132), Expect = 5e-23
Identities = 127/165 (77%), Gaps = 2/165 (1%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||| | |||| ||||||||||| |||||| || || |||| |||||
Sbjct 181646 TGATCTACGAAGAAACCCGTGGTGTTTTGAAGACTTTCCTCGAGGGTGTCATCCGTGATG 181587
Query 16596 CT-TTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTAT 16654
|| || || || || |||||||| || || ||||||||||| ||| | || |||| ||
Sbjct 181586 CTGTTACA-TACACTGAGCACGCCAAGCGCAAGACTGTCACTTCCCTTGACGTCGTTTAC 181528
Query 16655 GCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||||| | |||||||||| |||||||||| || |||||
Sbjct 181527 GCATTGAAGAGACAAGGCCGTACCCTTTATGGTTTCGGTGGTTAA 181483
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||||||||| | ||| | | |||| ||||| ||||| |||||||||||||| ||
Sbjct 181857 GCTAAGCGTCATCGTAAGATTT-TGAGAGACAACATTCAAGGTATCACCAAGCCAGCCAT 181799
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| | ||||| |||||||||||||| ||||||||| | ||||
Sbjct 181798 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 181758
>seq10
Length=1373444
Score = 100 bits (110), Expect = 4e-17
Identities = 80/94 (85%), Gaps = 2/94 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||||||| |||| | | |||| ||||||||||| || || |||||||||||
Sbjct 794815 GCCAAGCGTCATCGCAAGAT-TTTGAGAGACAACATCCAAGGCATAACTAAGCCAGCTAT 794873
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525
| | ||||| |||||||||||||| |||||||||
Sbjct 794874 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGT 794907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074426496278
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |