Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq39 120 5e-23 seq10 100 4e-17 >seq39 Length=392941 Score = 120 bits (132), Expect = 5e-23 Identities = 127/165 (77%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||| | |||| ||||||||||| |||||| || || |||| ||||| Sbjct 181646 TGATCTACGAAGAAACCCGTGGTGTTTTGAAGACTTTCCTCGAGGGTGTCATCCGTGATG 181587 Query 16596 CT-TTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTAT 16654 || || || || || |||||||| || || ||||||||||| ||| | || |||| || Sbjct 181586 CTGTTACA-TACACTGAGCACGCCAAGCGCAAGACTGTCACTTCCCTTGACGTCGTTTAC 181528 Query 16655 GCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||||| | |||||||||| |||||||||| || ||||| Sbjct 181527 GCATTGAAGAGACAAGGCCGTACCCTTTATGGTTTCGGTGGTTAA 181483 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||||| | ||| | | |||| ||||| ||||| |||||||||||||| || Sbjct 181857 GCTAAGCGTCATCGTAAGATTT-TGAGAGACAACATTCAAGGTATCACCAAGCCAGCCAT 181799 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | | ||||| |||||||||||||| ||||||||| | |||| Sbjct 181798 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 181758 >seq10 Length=1373444 Score = 100 bits (110), Expect = 4e-17 Identities = 80/94 (85%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||||||| |||| | | |||| ||||||||||| || || ||||||||||| Sbjct 794815 GCCAAGCGTCATCGCAAGAT-TTTGAGAGACAACATCCAAGGCATAACTAAGCCAGCTAT 794873 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525 | | ||||| |||||||||||||| ||||||||| Sbjct 794874 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGT 794907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074426496278