Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq29 302 6e-77 seq23 125 9e-24 >seq29 Length=608615 Score = 302 bits (334), Expect = 6e-77 Identities = 1326/2067 (64%), Gaps = 51/2067 (2%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 || |||||||| || || || || | | ||||| | |||||||||||| || || | | Sbjct 544373 GTAAATTGAATAGGTGCCGAGGCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAA 544432 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || | |||| || |||||||||| || | ||| | |||||| || Sbjct 544433 CCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCTTTCATG 544492 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || || |||||||||||| |||||| ||||| || || | || |||||||||| | Sbjct 544493 TGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAACA 544552 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || || || | |||||||||| ||| || |||| ||| || || |||||| | Sbjct 544553 ATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 544612 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 || | |||| || |||||||||||||| || || || | ||||| || | |||| | Sbjct 544613 TTGGGGATATTTTGGATGGATCCACCATCAGCAATGATACGGTTCTTCATATTATCAGAC 544672 Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351 || | | ||| | | || | || || || || || || || ||||||||| Sbjct 544673 CAGAGACCCATATCGACGAGATCTTTGAGAAGCCATGGGTTGACGACCTGGAATTCTCCA 544732 Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411 | | || | || | ||| || || ||||| ||||| | | || || || Sbjct 544733 GCAAGAACACGACGCGAGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTGAAACCA 544792 Query 62412 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62471 | ||||| | || ||||| |||||||| || || | | | || | | ||| Sbjct 544793 AGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGGATTCCG 544852 Query 62472 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 62531 | | |||| | || | | ||||||| ||| | ||| | ||| ||| Sbjct 544853 TGTTGCTTGATCGATTGCTTCAACGAGTCCCAATCCCACAAATCAGTAGGTGTAACACCC 544912 Query 62532 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 62591 ||| || ||| ||| | | || ||| ||| || |||||||| Sbjct 544913 CACATGTCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAAGTTTCGTATGGA 544972 Query 62592 CC---TTCCTTCTCAGCTAGTTCACAAC---TCGCCTCTAATGCACCGTAATAAATGGTT 62645 || |||||| | | || |||| | || || ||| ||| || || || Sbjct 544973 CCAAGTTCCTTTGC-----GATCTCAACGGATGAGGTC-AAGGCAGCGTGGTAGATAGTC 545026 Query 62646 TCGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG 62704 || || || | | || || | |||| ||||| | || |||||| | | | Sbjct 545027 TCAAAAATTTGGATGTTGAGGTGCTTG-GCTTCGGGAGAGTCGAATGGAAGACGAAGGGC 545085 Query 62705 AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62764 | ||| || || || | ||||||||||| | | ||||||||| || | ||| | Sbjct 545086 CAAAAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATT-GC 545144 Query 62765 GATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62823 |||| ||||| ||| |||||||| || || || ||||| || || | |||||| | Sbjct 545145 TCTTTCTCGCTTCCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAA 545204 Query 62824 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATCGCCCA---TC-TATTA- 62877 ||| |||| | || || | || || | ||||| || |||| || | ||| Sbjct 545205 CAACAACTTGGGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTGCCCTCATTCATGTTAA 545264 Query 62878 CAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 62937 |||| | ||| || | ||| |||| |||||| || ||||||| | | | | Sbjct 545265 CAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGT 545324 Query 62938 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTAC 62997 | | | ||||| ||||| | || | |||||||||| || | ||| |||| Sbjct 545325 ACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTTAC 545384 Query 62998 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 63057 |||| ||||| || ||||| || ||||| ||||| ||| | || || || | || | | Sbjct 545385 TCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCT 545444 Query 63058 CTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCT---C 63114 | | ||| | | ||| | | ||||||| || | ||| | |||| | | Sbjct 545445 CGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGTC---TTGCGAC-CCTTGCCAGCC 545500 Query 63115 TT-TCGTATAGTGT-ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGG 63172 || ||||| | | | ||| | || ||||| || || |||| | |||| || || Sbjct 545501 TTCTCGTA-ACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGG 545559 Query 63173 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 63232 |||||||| || ||||| | | ||| ||||||| | | || || ||||| ||||| Sbjct 545560 ACATTCATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAG 545619 Query 63233 ATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63291 |||||||||||| | || ||| || ||||| | | | | ||| || || || || Sbjct 545620 ATCAGGAATCCACA-AGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGAT 545678 Query 63292 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63351 |||| ||||| |||||| | | || ||| | |||||| || || | ||| | || | Sbjct 545679 TCTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAA 545738 Query 63352 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63411 | | ||||| || ||||| || || || || | ||||| |||||||| || |||||| Sbjct 545739 AAGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTC 545798 Query 63412 TCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGG 63471 | ||| |||| ||| ||||| || | || |||||||||| ||||||| ||| | | Sbjct 545799 GGAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAG 545858 Query 63472 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 63531 |||| || | ||| ||||| || || || || | || ||||| | || || Sbjct 545859 CACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAA 545918 Query 63532 GTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGC 63591 || || ||||| || ||||| || || ||||| || |||||| | || || || Sbjct 545919 TCTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACG 545978 Query 63592 TAGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 63650 ||| | || ||| | | || |||||| || | || || || || || ||||| Sbjct 545979 AAGAAAGTT-GTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAG 546037 Query 63651 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAAT 63709 | || | || | || |||||| |||||||| || || ||||| || | ||||| Sbjct 546038 TACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TGAAT 546096 Query 63710 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTT 63769 || || || |||||||| | ||| || || || | ||| | | ||| | | Sbjct 546097 ACCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACG 546156 Query 63770 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGT 63827 | | ||| ||| || | ||| || ||||| || || | ||| ||||| ||||| Sbjct 546157 TAGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCTCGA 546214 Query 63828 TCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATA 63887 ||||| | ||| | |||||||||| || | || | | |||| | || || || | Sbjct 546215 TCGTAGACTATAGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCA-AATGTTT 546272 Query 63888 CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGA-ATAAATCC 63944 ||| ||| || ||||| || | |||||| | || || ||| |||| ||||||| Sbjct 546273 CTTTGCTAATCATAGGAGATGGTGTGCCATTTCTTGGGTTTGTATA-TTGATATAAATCG 546331 Query 63945 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 64004 || || | | ||| |||| || |||| |||||| || || || || || || | | Sbjct 546332 CGGATAACGTGAGAGAATTGTTTCTTGGTTTGCTTGTGGAGGTTAGAGACTGCAATACGG 546391 Query 64005 GCGGCTAGAATGGCATAATCCGGATGT 64031 || |||||||| |||||||| |||||| Sbjct 546392 GCAGCTAGAATAGCATAATCGGGATGT 546418 >seq23 Length=743066 Score = 125 bits (138), Expect = 9e-24 Identities = 564/901 (63%), Gaps = 61/901 (7%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| || || || | || ||||| || || || || || |||| || ||||| Sbjct 463101 TTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTC 463160 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| || || || |||| | | || | ||| | |||| | | Sbjct 463161 TCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCAGAGCGAGGAGG 463220 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | | ||| || ||||| || || ||| ||||| | | |||||||| | || Sbjct 463221 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGA 463280 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 | |||||||||| | || | ||||||||| || || ||| || || || || | | Sbjct 463281 GCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGACA 463340 Query 33253 GATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 | ||||| || ||| | || | |||| | ||| || | | ||||| || Sbjct 463341 TCTTGAACGGATTGCTTGGATGGGCG-ATGCTTGAGATGGGAGAAGAGGAGGCATGCAAA 463399 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 || ||| || || ||||| | || ||||||||||| || |||||||| | ||| Sbjct 463400 GTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCCAT 463459 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 || |||||||| |||||||| || ||||| ||||| ||||| || ||||| || ||||| Sbjct 463460 GAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCTTC 463519 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCACTT 33488 || || || || || | || | | || || | |||| || ||||| || Sbjct 463520 AACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATCCATTT 463579 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGG------------------------CAT 33524 |||||| ||||||||||| || | ||||| ||| Sbjct 463580 GACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGGTTGTTAGATTGTACAT 463639 Query 33525 C---------------------------GTTTCTATGGCATTAAAGAGATA-Gttttttt 33556 | || || || || || || ||||| || |||| Sbjct 463640 CGCAGATGGGTGGGTTTATAACTTACTGGTATCGATAGCGTTGAATAGATATGTCTTTTG 463699 Query 33557 CATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTT 33616 | | || || | ||| || ||||| | ||| || |||| || |||||||| | Sbjct 463700 TGCTTGT-TCCTTGATATATGTGTCGATGAGAAGCGAGTATGTTTCAGAGTGAATGTTCT 463758 Query 33617 CAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAA 33676 | || || || ||||||||||| ||||| || || | || || ||||| || | Sbjct 463759 CCATCATGATTTGGAATCCGTAGAAGCATCTTGCTTCTGGGATTTGAACTTCACCACTGA 463818 Query 33677 ATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACAT 33736 |||| || |||| |||||||| || |||||||| || || || || || | || | Sbjct 463819 ATCGCTCAACCAAGTTTTCATTGACAATTCCGTCGGATGCAGCGAAGAATGCGAGAACGT 463878 Query 33737 GTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGATATCTTTAG 33793 | ||||| || ||||| | ||| || ||||| || | | ||| || | Sbjct 463879 GGGAGATAAAGTAGCGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGTAGATCCTTTG 463938 Query 33794 ATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGA 33853 | | ||| | ||||| | ||||| || ||||| |||||||| || ||||| | ||||| Sbjct 463939 ACAGATCAATCTCTTCTGCGGTCCAGAAAGATGCTTCTGCCTTCTTGTACATCTGCCAGA 463998 Query 33854 T 33854 | Sbjct 463999 T 463999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622940612333360