Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq29 313 6e-80 seq2 86.0 2e-11 >seq29 Length=608615 Score = 313 bits (346), Expect = 6e-80 Identities = 1154/1785 (65%), Gaps = 32/1785 (2%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCT-CGTATCAATGGTGATATTGTTGA 363449 ||||| | ||||| | ||| ||| ||||| ||| ||| || |||| | ||| || Sbjct 546192 TTCGGTTTCAAGACTCTTGAGCGATCATACCT-TCTACGTCTCGATGGCAAAGTTGCAGA 546134 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 ||| || || || ||| | ||||||||||| ||||||| || | ||| |||| Sbjct 546133 ACGTCCACAACAAATGATCATGCGTGTTGCGGTTGGTATTCACGGTGATGATATTGAGAG 546074 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACA 363567 || ||||| ||||| || || | || | ||| || || || ||| | |||||| Sbjct 546073 TGCCATTGAGACATACAA--TTTAATGTCAAACAAGTACTTTACACATGCCTCCCCAACA 546016 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAG 363627 | | | ||| || || | | |||| | ||||| ||||| || | | ||||| Sbjct 546015 CTCTTCTCTGCGGGTACCCCACAGGCACAACTTTCTTCGTGCTTCCTCATCGACATGAAA 545956 Query 363628 GACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAAT 363687 || ||| ||||| ||||| | ||||| | |||| |||||| | || || |||||| Sbjct 545955 GAAGATAGTATCGATGGTATTTACGACACTTTGAAGATTTGTGCCATGATCTCAAAGAAT 545896 Query 363688 GCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACAT---TCGC 363744 || || || |||||| | || |||| | ||||| || | | | | |||| Sbjct 545895 GCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCT----ACTGGTGCCTATATCGC 545840 Query 363745 -GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 || || ||| | || || || | ||||||||||| || || || |||| || || Sbjct 545839 CGGTACCAACGGAAATTCCAACGGCATTGTTCCCATGCTCCGAGTTTTCAACAACACCGC 545780 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 || || || ||||| ||||| |||||| || || |||||| | || || ||||| Sbjct 545779 CAGATATGTTGACCAAGGTGGTAACAAGCGCCCTGGTGCTTTTGCTGTTTACCTTGAGCC 545720 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 ||||||||| |||| ||||| ||||| || || || || || || || ||| | Sbjct 545719 ATGGCATGCCGATGTTTTCGAGTTCCTTGATCTACGCAAGAATCATGGTAAGGAAGAAGT 545660 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 || ||||||||||| |||||||| | ||| || |||| | || |||||||| || || Sbjct 545659 TCGCGCACGTGATCTCTTCTATGCCTTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGA 545600 Query 363984 GGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 || || | ||| | || | ||||| | |||||||| ||| | | || || | Sbjct 545599 -AAAGAACGGAGACTGGACCCTTATGTGCCCCAATGAATGTCCGGGTTTGGCAGACGTTT 545541 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 || || || | || ||||| || || | || || || || |||| ||| |||| Sbjct 545540 ATGGCGAGGAGTTTGAGGCTCTCTATGAGAGTTACGAGAAGGCTGGCAAGGGTCGCAAGA 545481 Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 | ||| || || ||||| |||| | || | || |||| | |||||||||| | Sbjct 545480 CCATTAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAGGCGCAAACCGAGACAGGAAATC 545421 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 | | ||| | ||||||||| | |||||| ||| ||||| || |||| || || | Sbjct 545420 CTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGTAACCAAAAGAACCTAGGAACTA 545361 Query 364223 TTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 ||| |||| |||| | || || ||||| |||| ||| | || || || ||| ||| Sbjct 545360 TTC-GCAGCTCCAACTTGTGCACGGAGATCGTTGAGTACTCTGCGCCGGATGAGGTTGCT 545302 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACTTTT 364335 |||||| | || || ||||| | || | |||| | || || || |||| Sbjct 545301 TGTTGTAACTTGGCTTCTATCGCTTTGCCAACTTTTGTTAACATGAATGAGGGCACTTAC 545242 Query 364336 GACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATC 364395 || ||| | ||| | || || ||| | || | | | ||| | ||||| |||| Sbjct 545241 GATTTCCAAAAGCTTCACGAGGTTACCCAAGTTGTTGTTAGAAATTTGAACAAGATTATT 545182 Query 364396 GACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCGAT 364454 |||| || |||||||| ||| ||||| || | | ||| | ||||| || || || Sbjct 545181 GACATCAACTATTATCCGGTTCAGGAAGCGAGAAAGAGC-AATTTCCGTCACCGACCTAT 545123 Query 364455 TGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTC 364514 | | | ||||| || || || ||||| | |||| || || | |||| || || Sbjct 545122 CGCTGTCGGTGTTCAAGGTCTTGCTGATGCTTTTTTGGCCCTTCGTCTTCCATTCGACTC 545063 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || || || || | | || ||||| || || || || || |||| Sbjct 545062 TCCCGAAGCCAAGCACCTCAACATCCAAATTTTTGAGACTATCTACCACGCTGCCTTGAC 545003 Query 364575 TGCTTCGTGTGATTTGGCAAA-AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 | || ||| | ||||| | | || | ||| |||||| | || ||||| Sbjct 545002 CTCATCCGTTGAGATCGCAAAGGAACTTGGTCCA-TACGAAACTTATCAAGGTTCCCCAG 544944 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 | || |||| || | || | || | ||| ||| || || ||| ||| | | Sbjct 544943 TCTCTAAGGGTGAACTTCAATACGACATGTGGGGTGTTACACCTACTGATTTGTGGGATT 544884 Query 364694 GGGATACGCT-ACGTTCCAACG-TTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGC 364751 |||| || | | | | | || | ||| | || || | |||||||| ||| || || Sbjct 544883 GGGACTCGTTGAAG--CAATCGATCAAGCAACACGGAATCCGCAACTCTCTCCTTGTTGC 544826 Query 364752 GCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTT 364811 ||| ||||| || ||| || | || ||||| || |||||| || |||||||| | Sbjct 544825 GCCTATGCCAACTGCTAGCACATCCCAAATCCTTGGTTTCAACGAATGTTTCGAACCTTA 544766 Query 364812 TACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871 ||| || | || || || || |||||| | |||||||| | ||| || || | Sbjct 544765 TACTTCGAACATCTACTCGCGTCGTGTTCTTGCTGGAGAATTCCAGGTCGTCAACCCATG 544706 Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931 || |||| ||||| ||| || || ||| ||| | ||||||||| |||||| Sbjct 544705 GCTTCTCAAAGATCTCGTCGATATGGGTCTCTGGTCTGATAATATGAAGAACCGTATCAT 544646 Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTA 364991 || | | ||| || | || || || || |||||| || | ||| | |||| Sbjct 544645 TGCTGATGGTGGATCCATCCAAAATATCCCCAACATTCCAGCTGACATCAAGGCCCTTTA 544586 Query 364992 CAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGC 365051 ||| || || |||||||| ||| |||||| | || | ||||| |||||||| ||||| Sbjct 544585 CAAGACTGTTTGGGAAATCTCCCAGCGAACAATTGTTCAAATGGCTGCCGATCGTGGTGC 544526 Query 365052 TTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCT 365111 ||| || ||| || || | ||| | ||||| | || || | |||| | Sbjct 544525 TTTCATTGATCAATCTCAATCTATGAACATTCACATGAAAGATCCTACAATGGGCAAGAT 544466 Query 365112 TACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||||| |||||||| || ||||||| ||| | ||||| || Sbjct 544465 CACATCTATGCATTTTGCTGGCTGGAAATTGGGTTTGAAGACCGG 544421 >seq2 Length=1995478 Score = 86.0 bits (94), Expect = 2e-11 Identities = 90/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 111421 TAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCT-TGTCGAC 111479 |||||||||||||||| || ||||| | | || | ||||||| ||||| || | || | Sbjct 606768 TAAAAATTTGGGATGGGAACGGATCCAGAGCCTATTTAGATTCCGTTGGCCTCTCTCACC 606827 Query 111480 AACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGC 111535 | | ||||| |||||||| || || || |||||||||||||| || ||||| || Sbjct 606828 GA-GCTGAAGGAGATCTCGGTCCCGTATATGGATTTCAATGGCGTCATTTTGGCGC 606882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303339472461572