Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq27 120 3e-22 seq11 113 4e-20 seq29 82.4 7e-11 >seq27 Length=671268 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| | ||| || || | ||| ||||| ||||| |||||||| ||| Sbjct 263801 CCACCACGGAGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAA 263860 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| || ||||| || ||| |||| || ||||| ||||| || ||| Sbjct 263861 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGG 263920 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | || | || || | ||||| | Sbjct 263921 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 263980 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 |||| ||| | |||||| || || || || || ||||| |||||||||||| Sbjct 263981 TCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGACT 264031 >seq11 Length=1281110 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || |||||||||||||||||||| || ||| Sbjct 150999 CCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTC 150940 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| || || || || ||| | || |||||||| ||||| || ||| Sbjct 150939 AAGGTGCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGG 150880 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||| | | || | |||||| | ||||||| Sbjct 150879 ATTCCCTCCTTGTCCTGGATCTTAGACTTAACATTATCAATTGTATCGCTCGACTCGACC 150820 Query 131188 TCGACGGTAACGGTTTTACCGGTTA 131212 || | ||| | ||| || || |||| Sbjct 150819 TCAAGGGTGATGGTCTTGCCAGTTA 150795 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||||| || || |||||||| ||||||||||| Sbjct 151510 CCACCACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAA 151451 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || || || || || ||| |||| | ||| || ||||| || ||| Sbjct 151450 AGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGG 151391 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| || || ||| | | || | ||||| | ||||| | Sbjct 151390 ATTCCCTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACC 151331 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||||| ||| || |||||||||||||| Sbjct 151330 TCCAAAGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284 >seq29 Length=608615 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| || || || || | ||||||||| | || | ||| || || | ||| Sbjct 544712 TTGACGACCTGGAATTCTCCAGCAAGAACACGACGCGAGTAGATGTTCGAAGTATAAGGT 544771 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || ||| | ||||| || |||||||| | || | || || ||||| ||| || Sbjct 544772 TCGAAACATTCGTTGAAACCAAGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCAACA 544831 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||||| | |||||| || ||| | || |||||||||| Sbjct 544832 AGGAGAGAGTTGCGGATTCCGTGTTGCTTGATCGATTGCTTCAACGAGTCCCAATCCCAC 544891 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTG 145272 | ||| || | || ||||||||||||| || Sbjct 544892 AAATCAGTAGGTGTAACACCCCACATGTCGTATTG 544926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007808464640