Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq29 284 2e-71 seq23 109 7e-19 >seq29 Length=608615 Score = 284 bits (314), Expect = 2e-71 Identities = 1322/2067 (64%), Gaps = 51/2067 (2%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 || |||||||| || || || || | | ||||| | |||||||||||| || || | | Sbjct 544373 GTAAATTGAATAGGTGCCGAGGCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAA 544432 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || | |||| || |||||||||| || | ||| | |||||| || Sbjct 544433 CCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCTTTCATG 544492 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 || || |||||||||||| |||||| ||||| || || | || |||||||||| | | Sbjct 544493 TGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAACA 544552 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 || || || | |||||||||| ||| || |||| ||| || || |||||| | Sbjct 544553 ATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 544612 Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146 || | |||| || |||||||||||||| || || || | ||||| || | |||| | Sbjct 544613 TTGGGGATATTTTGGATGGATCCACCATCAGCAATGATACGGTTCTTCATATTATCAGAC 544672 Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206 || | | ||| | | || | || || || || || || || ||||||||| Sbjct 544673 CAGAGACCCATATCGACGAGATCTTTGAGAAGCCATGGGTTGACGACCTGGAATTCTCCA 544732 Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266 | | || | || | ||| || || ||||| ||||| | | | || || || Sbjct 544733 GCAAGAACACGACGCGAGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTGAAACCA 544792 Query 62267 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62326 | ||||| | || ||||| |||||||| || || | | | || | | ||| Sbjct 544793 AGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGGATTCCG 544852 Query 62327 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 62386 | | |||| | || | | ||||||| ||| | ||| | ||| ||| Sbjct 544853 TGTTGCTTGATCGATTGCTTCAACGAGTCCCAATCCCACAAATCAGTAGGTGTAACACCC 544912 Query 62387 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 62446 ||| || ||| ||| | | || ||| ||| || |||||||| Sbjct 544913 CACATGTCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAAGTTTCGTATGGA 544972 Query 62447 CC---TTCCTTCTCAGCTAGTTCACAAC---TCGCCTCTAATGCACCGTAATAAATGGTT 62500 || |||||| | | || |||| | || || ||| ||| || || || Sbjct 544973 CCAAGTTCCTTTGC-----GATCTCAACGGATGAGGTC-AAGGCAGCGTGGTAGATAGTC 545026 Query 62501 TCGAAGATCTTCTTATTTAGAT-CTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG 62559 || || || | | || || | |||| ||||| | || |||||| | | | Sbjct 545027 TCAAAAATTTGGATGTTGAGGTGCTTG-GCTTCGGGAGAGTCGAATGGAAGACGAAGGGC 545085 Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619 | ||| || || || | ||||||||||| | | ||||||||| || | ||| | Sbjct 545086 CAAAAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATT-GC 545144 Query 62620 GATTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 62678 |||| ||||| ||| |||||||| || || || ||||| || || | |||||| | Sbjct 545145 TCTTTCTCGCTTCCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAA 545204 Query 62679 CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-AATCGCCCA---TC-TATTA- 62732 ||| |||| | || || | || || | ||||| || |||| || | ||| Sbjct 545205 CAACAACTTGGGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTGCCCTCATTCATGTTAA 545264 Query 62733 CAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 62792 |||| | ||| || | ||| |||| |||||| || ||||||| | | | | Sbjct 545265 CAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGT 545324 Query 62793 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTAC 62852 | | | ||||| ||||| | || | || ||||||| || | ||| |||| Sbjct 545325 ACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTTAC 545384 Query 62853 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 62912 |||| ||||| || ||||| || ||||| ||||| ||| | || || || | || | | Sbjct 545385 TCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCT 545444 Query 62913 CTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCT--CT 62970 | | ||| | | ||| | | ||||||| || | ||| | ||| | || Sbjct 545445 CGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGTC---TTGCGACCCTTGCCAGCCT 545501 Query 62971 T-TCGTATAGTGT-ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGA 63028 | ||||| | | | ||| | || ||||| || || |||| | ||| || ||| Sbjct 545502 TCTCGTA-ACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGGA 545560 Query 63029 CATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGA 63088 ||||||| || ||||| | | ||| ||||||| | | || || ||||| |||||| Sbjct 545561 CATTCATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAGA 545620 Query 63089 TCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 63147 ||||||||||| | || ||| || ||||| | | | | ||| || || || ||| Sbjct 545621 TCAGGAATCCACA-AGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGATT 545679 Query 63148 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63207 ||| ||||| |||||| | | || ||| | |||||| || || | ||| | || | Sbjct 545680 CTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAA 545739 Query 63208 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63267 | | ||||| || ||||| || || || || | ||||| |||||||| || |||||| Sbjct 545740 AGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCG 545799 Query 63268 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGC 63327 | ||| |||| ||| || ||||| | || ||||| || | ||||||| ||| | || Sbjct 545800 GAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGC 545859 Query 63328 ACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCG 63387 ||| || | ||| ||||| || || || || | || ||||| | || || Sbjct 545860 ACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAAT 545919 Query 63388 TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 63447 || || || || || || || || |||||||| || |||||| | || || || Sbjct 545920 CTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGA 545979 Query 63448 AGACATTTGGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACC 63506 ||| | || ||| | | || |||||| || | || || || || || ||||| Sbjct 545980 AGAAAGTT-GTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAGT 546038 Query 63507 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATT 63565 | || | || | || |||||| |||||||| || || ||||| || | ||||| Sbjct 546039 ACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TGAATA 546097 Query 63566 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 63625 || || || |||||||| | ||| || || || | ||| | | ||| | | Sbjct 546098 CCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACGT 546157 Query 63626 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 63683 | | ||| ||| || | ||| || ||||| || || | ||| ||||| ||||| | Sbjct 546158 AGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCTCGAT 546215 Query 63684 CGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC--ATGGTAAT 63741 |||| | ||| | |||||||||| || | || | | |||| |||| | ||| | | Sbjct 546216 CGTAGACTATAGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCAAATGTT--T 546272 Query 63742 ACTTG-AAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGA-ATAAATCC 63799 ||| ||| |||||| | || | |||||| | || || ||| |||| ||||||| Sbjct 546273 CTTTGCTAATCATAGGAGATGGTGTGCCATTTCTTGGGTTTGTATA-TTGATATAAATCG 546331 Query 63800 TCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 63859 || || | | ||| |||| || |||| ||||| || || || || || || | Sbjct 546332 CGGATAACGTGAGAGAATTGTTTCTTGGTTTGCTTGTGGAGGTTAGAGACTGCAATACGG 546391 Query 63860 GCGGCTAGAATGGCATAATCCGGATGT 63886 || |||||||| |||||||| |||||| Sbjct 546392 GCAGCTAGAATAGCATAATCGGGATGT 546418 >seq23 Length=743066 Score = 109 bits (120), Expect = 7e-19 Identities = 562/903 (62%), Gaps = 65/903 (7%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| || || || | || ||||| || || || || || | || || ||||| Sbjct 463101 TTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTC 463160 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 |||||||| |||||||| |||| | | || | ||| | |||| | | Sbjct 463161 TCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCAGAGCGAGGAGG 463220 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 | | ||| || || || || || ||| ||||| | | |||||||| | || Sbjct 463221 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGA 463280 Query 32550 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 32609 | |||||||||| | || | ||||||||| || || || || || || || | | Sbjct 463281 GCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGACA 463340 Query 32610 GATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 32666 |||| || | || ||| | || | || | | ||| || | | ||||| Sbjct 463341 --TCTTGAACGGATTGCTTGGATGGGCG-ATGCTTGAGATGGGAGAAGAGGAGGCATGCA 463397 Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726 || || ||| || || ||||| | || | ||||||||| || |||||||| | | Sbjct 463398 AAGTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCC 463457 Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 32786 || || |||||||| |||||||| || ||||| || || ||||| || |||||||| ||| Sbjct 463458 ATGAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCT 463517 Query 32787 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATGTATCCAC 32843 || || || || || || | || | | || || | | ||| || ||||| Sbjct 463518 TCAACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATCCAT 463577 Query 32844 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTC------------------ 32885 || |||||| ||||||||||| || | ||||| | | || Sbjct 463578 TTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGGTTGTTAGATTGTAC 463637 Query 32886 ---------------------------------TCTATAGCATTAAAGAGATA-Gttttt 32911 || ||||| || || ||||| || ||| Sbjct 463638 ATCGCAGATGGGTGGGTTTATAACTTACTGGTATCGATAGCGTTGAATAGATATGTCTTT 463697 Query 32912 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 32971 | | | || || | |||||| || || | ||| || |||| || |||||||| Sbjct 463698 TGTGCTTGT-TCCTTGATATATGTGTCGATGAGAAGCGAGTATGTTTCAGAGTGAATGTT 463756 Query 32972 TTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACA 33031 || || ||||| ||||||||||||||||| || || | || || ||||| || Sbjct 463757 CTCCATCATGATTTGGAATCCGTAGAAGCATCTTGCTTCTGGGATTTGAACTTCACCACT 463816 Query 33032 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 33091 ||||| || | || |||||||| || |||||||| || || || || || | || Sbjct 463817 GAATCGCTCAACCAAGTTTTCATTGACAATTCCGTCGGATGCAGCGAAGAATGCGAGAAC 463876 Query 33092 ATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGATATCTTT 33148 || ||||| || ||||| | ||| || ||||| || | | ||| || Sbjct 463877 GTGGGAGATAAAGTAGCGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGTAGATCCTT 463936 Query 33149 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 33208 || | ||| | ||||| | ||||| || ||||| |||||||| || ||||| | ||| Sbjct 463937 TGACAGATCAATCTCTTCTGCGGTCCAGAAAGATGCTTCTGCCTTCTTGTACATCTGCCA 463996 Query 33209 GAT 33211 ||| Sbjct 463997 GAT 463999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633625299341600