Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq11 152 4e-32 seq29 125 6e-24 seq27 105 6e-18 >seq11 Length=1281110 Score = 152 bits (168), Expect = 4e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||||||||||| || || ||||| | || || || | | Sbjct 151284 ATGCAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCG 151343 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || | || || ||||||||||||||||| || |||||||| ||| Sbjct 151344 GATACCATCGATAATGTAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCAA 151403 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| || || || ||||| | || ||| ||||||| | || ||||||||| Sbjct 151404 CAACGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCGGATTACAAC 151463 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||| ||||| || ||||||| || Sbjct 151464 ATCCAAAAGGAATCTACTTTACATTTGGT 151492 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288 ||||||| || | ||||| || || |||| || || || ||| | | || || | | Sbjct 151066 TTGTTAAGACACTCACCGGAAAGACCATCACGCTCGAGGTTGAATCTTCTGACACTATCG 151125 Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348 | | | || || ||||||||||||||||| ||||| ||||||||||||||| | | Sbjct 151126 ATAACGTTAAGTCGAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTGA 151185 Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 | || ||||| || || | |||||| |||||| ||||||||||||| ||||| || | Sbjct 151186 TCTTCGCCGGAAAGCAACTTGAGGATGGTCGCACCCTCTCCGATTACAATATTCAGAAGG 151245 Query 22409 AATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| ||| | || || || | || | ||||| ||| Sbjct 151246 AATCTACCCTCCACTTGGTCCTTAGACTTCGCGGTGGT 151283 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| ||||| || || || || | || | ||||| ||| | | Sbjct 151512 ATGCAAATCTTTGTTAAGACTTTGACTGGGAAGACAATTACATTAGAAGTTGAATCGTCA 151571 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || |||| ||| ||||| || ||||||||||| || || || ||| Sbjct 151572 GATACTATTGATAATGTCAAGTCAAAGATTCAGGATAAGGAGGGTATCCCCCCTGACCAA 151631 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || ||||| |||||| | || | ||||| |||||| Sbjct 151632 CAGAGATTGATCTTTGCAGGAAAGCAGTTGGAGGATGGTAGAACACTTTCCGACTACAAC 151691 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||| ||| |||| | || || || Sbjct 151692 ATTCAAAAGGAAAGCACCTTGCACTTGGT 151720 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 22241 TAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAAC 22300 |||| || || || |||| ||||| || || | | |||||| | || || | || Sbjct 150795 TAACTGGCAAGACCATCACCCTTGAGGTCGAGTCGAGCGATACAATTGATAATGTTAAGT 150854 Query 22301 AAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCA 22360 || || || ||||||||||| || || ||||| ||||| ||| | || || ||||| | Sbjct 150855 CTAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAA 150914 Query 22361 AACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATAC 22420 |||| | |||||| |||||| | || |||||||||||||| || ||||| | | Sbjct 150915 AACAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCCACTCTCC 150974 Query 22421 ATTTAGTT 22428 || | ||| Sbjct 150975 ATCTCGTT 150982 >seq29 Length=608615 Score = 125 bits (138), Expect = 6e-24 Identities = 587/916 (64%), Gaps = 27/916 (3%) Strand=Plus/Plus Query 129580 GGATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTAT 129639 ||||| ||||||||||| ||||| ||||| ||||| | || |||| || || || | Sbjct 545165 GGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAACAACAACTTGGGTAACCTCG 545224 Query 129640 TTTAACATTTCAAAATTGTACTCGCCTACATCGATGTCGACAAATTGATTGACACAA--A 129697 | | | ||| |||| ||| ||| ||| |||| ||||| ||| || | | Sbjct 545225 TGAAGCTTTTGGAAATCGTAAGTGCCCTCATTCATGTTAACAAAAG--TTGGCAAAGCGA 545282 Query 129698 TCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGC 129757 | || ||||| || || ||| || | || |||||| || || || | || Sbjct 545283 TAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGTACTCAACGATCTCCGTGC 545342 Query 129758 ACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCAT 129817 |||| || | ||| || || | | |||||| ||||| ||| ||||||| |||| Sbjct 545343 ACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCAT 545402 Query 129818 CTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAAC- 129876 ||||||| | |||| | || | || || ||| ||||| |||| ||| | | || Sbjct 545403 CTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCTCGAGAATAG---AGTACC 545459 Query 129877 -AAG-TCTCGAGCCTTGATCTGTCTTAC-AAATTTGCCACATTTCTCGTATGCCACATAC 129933 ||| | | ||||||| || ||||| | | |||||| |||||||| | |||| Sbjct 545460 AAAGCTTTTGAGCCTTAAT-GGTCTTGCGACCCTTGCCAGCCTTCTCGTAACTCTCATAG 545518 Query 129934 AGTTGTTCAAATTCTGAGCCGTGTACG-GTGTCGAGCAACGGCGATTCACGCGGACACAT 129992 || ||||| || ||| | ||| || | | | ||| ||||| || ||||| Sbjct 545519 AGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAAC-CCGGACATTCATTGGGGCACAT 545577 Query 129993 CAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGC 130052 | |||| ||| | | ||| || || ||||| || | ||| || | ||||| ||| Sbjct 545578 AAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAAGGC 545637 Query 130053 GTACAACAAATC----TCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAA 130108 || || | ||| |||| |||| |||| || | || ||| || |||| Sbjct 545638 ATAGAAGAGATCACGTGCGCGAACTTCT-TCCTTACCATGATTCTTGCGT---AGATCAA 545693 Query 130109 GGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTT 130168 |||| ||| ||| ||||| ||||| || |||| |||| || | || || || | Sbjct 545694 GGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCACCAGGGCGCT 545753 Query 130169 TG---CCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCA 130225 || || ||||||||||| | | ||| |||||| | ||||| | ||| | | | Sbjct 545754 TGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATGGGAACAA 545813 Query 130226 ATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAA 130285 ||||||| | ||||| || | | || | ||| ||| || | | |||| Sbjct 545814 TGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCACGGATTCTGTGAA 545873 Query 130286 CGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGTAGCGTTTCAT 130345 | | ||||| || || ||| || ||||| |||| || ||| | || || | Sbjct 545874 TGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTGTCGT 545933 Query 130346 AAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGAGGCCAATTGGGCGT 130405 |||| ||| ||||||| |||||||| |||| | |||||| ||||| | | ||| || | Sbjct 545934 AAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAGAAAGTTGTGCCT 545993 Query 130406 AACATG-ATCCGCTGGCAAACAAAGTTGGACTTGCATGTGTATACATTTTGTGTGCCATC 130464 | | |||| | || | ||||| ||||||||| | |||| || ||| Sbjct 545994 GTGGGGTACCCGC-AGAGAAGAGTGTTGGGGAGGCATGTGTAAAGTACTTGTTTGACATT 546052 Query 130465 AAATTGTACGTTTCAA 130480 |||||||| || |||| Sbjct 546053 AAATTGTATGTCTCAA 546068 >seq27 Length=671268 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || ||||| |||| || || || || | | Sbjct 264027 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 263968 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || || ||||||||||| || |||||||| ||| Sbjct 263967 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 263908 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || || || || | |||||| ||| || | ||||| |||||| Sbjct 263907 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 263848 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || |||||||| |||||| | || || || || || | || || ||| Sbjct 263847 ATCCAAAAAGAGTCCACCCTTCACTTGGTGTTACGTCTCCGTGGTGGT 263800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723672341990