Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq27 194 3e-44
seq11 170 4e-37
seq54 138 2e-27
>seq27
Length=671268
Score = 194 bits (214), Expect = 3e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || || |||||||| || |||||||||||||||||||| || |||||
Sbjct 263801 CCACCACGGAGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAA 263860
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||||| || ||||| || | || ||||||||||||||
Sbjct 263861 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGG 263920
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | |||||| ||||||||||| | || || ||
Sbjct 263921 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 263980
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||||||| ||||| |||||||||||||| ||||||||
Sbjct 263981 TCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027
>seq11
Length=1281110
Score = 170 bits (188), Expect = 4e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | ||||| |||| || || || ||||||||||| ||||| ||
Sbjct 151510 CCACCACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAA 151451
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | || || || ||||| || || | |||||||||||||||
Sbjct 151450 AGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGG 151391
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||||||||| | ||| || |||||||| || | || || ||
Sbjct 151390 ATTCCCTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACC 151331
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| ||||| || | ||||||||||| ||||||||
Sbjct 151330 TCCAAAGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284
Score = 154 bits (170), Expect = 3e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| | | |||||||| || || || || || || || || |||||||||
Sbjct 151282 CCACCGCGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAG 151223
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||||| |||||||| || | | |||||| ||||| |||
Sbjct 151222 AGGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGA 151163
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||||||||| | ||| ||| ||||| ||||| | ||||| ||
Sbjct 151162 ATTCCCTCCTTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACC 151103
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449
|| | |||||||| ||||| ||||| ||||| ||
Sbjct 151102 TCGAGCGTGATGGTCTTTCCGGTGAGTGTCTTAAC 151068
Score = 86.0 bits (94), Expect = 1e-11
Identities = 144/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || ||||| || | || | || || |||||||| ||||| ||||| || ||
Sbjct 151001 TTCCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCAC 150942
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || | ||||| || | || || |||||||| || | | ||||||||||| |
Sbjct 150941 TCAAGGTGCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGG 150882
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411
| || || |||||||| || ||||| | ||| || || || || || ||| || ||
Sbjct 150881 GGATTCCCTCCTTGTCCTGGATCTTAGACTTAACATTATCAATTGTATC-GCTCGACTCG 150823
Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGT 68437
|| || | ||||||||| || || ||
Sbjct 150822 ACCTCAAGGGTGATGGTCTTGCCAGT 150797
>seq54
Length=188590
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
||||||||||| || || ||||| || | || || || | ||||| || ||||| ||
Sbjct 62443 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 62502
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| | |||||||||||| ||||| || |||||||| || ||||| | |||||| |||
Sbjct 62503 AAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 62562
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | ||||||||| || ||||| ||||||||||||||
Sbjct 62563 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 62621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921612653843120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |