Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq11 129 1e-24
seq27 122 2e-22
seq23 100 7e-16
seq54 98.7 2e-15
>seq11
Length=1281110
Score = 129 bits (142), Expect = 1e-24
Identities = 160/218 (73%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| |||||||| || | || | || ||| || || ||||| || |||| |
Sbjct 151282 CCACCGCGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAG 151223
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | ||| ||||| |||||||||| ||| |||||| || |||
Sbjct 151222 AGGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGA---TCGGGG 151166
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || || || || |||| || ||||| || |||| || |||||
Sbjct 151165 GGAATTCCCTCCTTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCA 151106
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| ||||||||||| ||||| ||||| || ||||| ||
Sbjct 151105 ACCTCGAGCGTGATGGTCTTTCCGGTGAGTGTCTTAAC 151068
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| || | ||| | || ||| |||||||| || || || |
Sbjct 151510 CCACCACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAA 151451
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | |||||| || |||||||| ||||| ||||| ||||
Sbjct 151450 AGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGG 151391
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||||| || || || || || || | || || || || || | ||| ||| || ||
Sbjct 151390 ATTCCCTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACC 151331
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | ||||| ||||| ||||| | |||||||||||| ||||||||
Sbjct 151330 TCCAAAGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284
>seq27
Length=671268
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | | || | |||| ||| ||||||||||| || |||||||
Sbjct 263801 CCACCACGGAGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAA 263860
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | ||| ||||| |||||||||| |||||||| ||||
Sbjct 263861 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGG 263920
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||||| || || |||||||| || | || || || || || | || || || ||
Sbjct 263921 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 263980
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| || || || || || ||||||||||| ||||||||
Sbjct 263981 TCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027
>seq23
Length=743066
Score = 100 bits (110), Expect = 7e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 269131 GACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAA 269190
|| ||| | |||||| || | | || ||||| || ||||||||| ||||| |||||
Sbjct 463297 GAGGCTCTTCCATGTGCTCTCTTGGGAATGAACTCCACTCTCATGAAGCAATACATCGAG 463238
Query 269191 TTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAAT 269250
||||| ||||||||| || || || || ||| | || ||||| |||| || ||
Sbjct 463237 TTCGTTGCTGATCGTCTCCTCCTCGCTCTGGGTAACGACAAAGTCTACAGATCTGCCAAC 463178
Query 269251 CCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGT 269310
|| |||| ||| ||||| || || | | || ||||| ||||||||||| ||| |
Sbjct 463177 CCATTCGACTTCATGGAGAATATCTCCTTGGCTGGCAAGACCAACTTCTTCGAGAAGAGA 463118
Query 269311 GTCAGCGACTATCAACGTCCTGGTGTAATG 269340
|| |||| || ||| ||||||| |||
Sbjct 463117 GTTGGCGATTACCAAAAGGCTGGTGTCATG 463088
>seq54
Length=188590
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|||||||| || ||||| | ||| || |||||||| || | ||| ||||| |||||||||
Sbjct 62443 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 62502
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
| || ||||| || ||||| || || |||||||| || | || || || ||
Sbjct 62503 AAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 62562
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | || || || || || || ||||| ||||| || || || |||||||||||
Sbjct 62563 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 62621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179641613283588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |