Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq27 120 3e-22 seq11 96.9 4e-15 >seq27 Length=671268 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| |||||||| || | ||| ||| ||||| || ||||| || | ||||| || | Sbjct 263812 ACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCC 263871 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || || ||||| |||||||| || | |||||| ||||||| ||| | | |||||| Sbjct 263872 ATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTT 263931 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 |||| ||| || |||| | | | ||||| || || || |||| ||||| Sbjct 263932 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 263991 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||||||||| || ||||| || ||||| ||||| Sbjct 263992 GGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027 >seq11 Length=1281110 Score = 96.9 bits (106), Expect = 4e-15 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032 |||||| |||| || | | ||| | |||||| ||||| ||||| ||||||||||| ||| Sbjct 151747 ATTTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTG 151688 Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092 || || | || || | | || || | |||||| || || || || | || ||| ||| Sbjct 151687 TAGTCGGAAAGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGG 151628 Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCT 42151 || | || | | |||||| ||| ||| | |||| |||| | | | || || Sbjct 151627 TCAGGGGGGATACCCTCCTTATCC-TGAATCTTTGACTTGACATTATCAATAGTATCTGA 151569 Query 42152 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| || || | || || || || || || | ||||| |||||||||||||| Sbjct 151568 CGATTCAACTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543207055524640