Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq29 154 1e-32
>seq29
Length=608615
Score = 154 bits (170), Expect = 1e-32
Identities = 593/926 (64%), Gaps = 4/926 (0%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | ||||| ||||| ||| || ||||| || | ||||||
Sbjct 546204 AACTACCAATACTTCGGTTTCAAGACTCTTGAGCGATCATACCTTCTACGTCTCGATGGC 546145
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| ||| | || || || || || || | ||||| || || | || |||||||| |
Sbjct 546144 AAAGTTGCAGAACGTCCACAACAAATGATCATGCGTGTTGCGGTTGGTATTCACGGTGAT 546085
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893
|| || || || | | | | || ||| ||||| | ||| |||| |
Sbjct 546084 GATATTGAGAGTGCCATTGAGACATACAATTTAATGTCAAACAAGTACTTTACACATG-C 546026
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953
| |||| || || ||| ||||| ||||| | |||| | |||||||| ||||| ||
Sbjct 546025 CTCCCCAACACTCTTCTCTGCGGGTACCCCACAGGCACAACTTTCTTCGTGCTTCCTCAT 545966
Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
||| | || | || ||| || |||| ||||| | ||| ||||| | |
Sbjct 545965 CGAC-ATGAAAGAAGATAGTATCGATGGTATTTACGACACTTTGAAGATTTGTGCCATGA 545907
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
||||||| | || || || || || ||| | ||| | ||||| | ||| |||
Sbjct 545906 TCTCAAAGAATGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGCCT 545847
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
| ||| ||||||||| || | ||||||||| | || || |||||||| || |||||||
Sbjct 545846 ATATCGCCGGTACCAACGGAAATTCCAACGGCATTGTTCCCATGCTCCGAGTTTTCAACA 545787
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || | || || ||||| |||||| | | | ||| |||| || || || |
Sbjct 545786 ACACCGCCAGATATGTTGACCAAGGTGGTAACAAGCGCCCTGGTGCTTTTGCTGTTTACC 545727
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
| ||||| ||||| || || || | ||| | || || || ||||| || || || |
Sbjct 545726 TTGAGCCATGGCATGCCGATGTTTTCGAGTTCCTTGATCTACGCAAGAATCATGGTAAGG 545667
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| | | || | || |||||||| || | ||| | || || || || ||||| |
Sbjct 545666 AAGAAGTTCGCGCACGTGATCTCTTCTATGCCTTGTGGATTCCTGATCTCTTCATGAAGC 545607
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| || || || ||| | ||||| ||| | || |||||||||||||| || || | |
Sbjct 545606 GTGTTGAAAAGAACGGAGACTGGACCCTTATGTGCCCCAATGAATGTCCGGGTTTGGCAG 545547
Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432
|||||| ||| | ||||| | | |||| ||||||| | |||||||
Sbjct 545546 ACGTTTATGGCGAGGAGTTTGAGGCTCTCTATGAGAGTTACGAGAAGGCTGGCAAGGGTC 545487
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
| ||| || | ||| ||||| ||| | || | || | || ||||| |
Sbjct 545486 GCAAGACCATTAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAGGCGCAAACCGAGACAG 545427
Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
| | || | ||| | | ||| || | |||| ||| ||||| || |||| |
Sbjct 545426 GAAATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGTAACCAAAAGAACCTAG 545367
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| || ||||| || ||||||| ||||| || ||||| || | ||||| |||
Sbjct 545366 GAACTATTCGCAGCTCCAACTTGTGCACGGAGATCGTTGAGTACTCTGCGCCGGATGAGG 545307
Query 94613 TTGCTGTGTGTAACCTGGGCTCCATC 94638
||||| |||||| ||| || |||
Sbjct 545306 TTGCTTGTTGTAACTTGGCTTCTATC 545281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494717968302160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |