Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq29 154 1e-32 >seq29 Length=608615 Score = 154 bits (170), Expect = 1e-32 Identities = 593/926 (64%), Gaps = 4/926 (0%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | ||||| ||||| ||| || ||||| || | |||||| Sbjct 546204 AACTACCAATACTTCGGTTTCAAGACTCTTGAGCGATCATACCTTCTACGTCTCGATGGC 546145 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | || || || || || || | ||||| || || | || |||||||| | Sbjct 546144 AAAGTTGCAGAACGTCCACAACAAATGATCATGCGTGTTGCGGTTGGTATTCACGGTGAT 546085 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 || || || || | | | | || ||| ||||| | ||| |||| | Sbjct 546084 GATATTGAGAGTGCCATTGAGACATACAATTTAATGTCAAACAAGTACTTTACACATG-C 546026 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | |||| || || ||| ||||| ||||| | |||| | |||||||| ||||| || Sbjct 546025 CTCCCCAACACTCTTCTCTGCGGGTACCCCACAGGCACAACTTTCTTCGTGCTTCCTCAT 545966 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | || | || ||| || |||| ||||| | ||| ||||| | | Sbjct 545965 CGAC-ATGAAAGAAGATAGTATCGATGGTATTTACGACACTTTGAAGATTTGTGCCATGA 545907 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 ||||||| | || || || || || ||| | ||| | ||||| | ||| ||| Sbjct 545906 TCTCAAAGAATGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGCCT 545847 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 | ||| ||||||||| || | ||||||||| | || || |||||||| || ||||||| Sbjct 545846 ATATCGCCGGTACCAACGGAAATTCCAACGGCATTGTTCCCATGCTCCGAGTTTTCAACA 545787 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || | || || ||||| |||||| | | | ||| |||| || || || | Sbjct 545786 ACACCGCCAGATATGTTGACCAAGGTGGTAACAAGCGCCCTGGTGCTTTTGCTGTTTACC 545727 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| ||||| || || || | ||| | || || || ||||| || || || | Sbjct 545726 TTGAGCCATGGCATGCCGATGTTTTCGAGTTCCTTGATCTACGCAAGAATCATGGTAAGG 545667 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | | || | || |||||||| || | ||| | || || || || ||||| | Sbjct 545666 AAGAAGTTCGCGCACGTGATCTCTTCTATGCCTTGTGGATTCCTGATCTCTTCATGAAGC 545607 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || || || ||| | ||||| ||| | || |||||||||||||| || || | | Sbjct 545606 GTGTTGAAAAGAACGGAGACTGGACCCTTATGTGCCCCAATGAATGTCCGGGTTTGGCAG 545547 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 |||||| ||| | ||||| | | |||| ||||||| | ||||||| Sbjct 545546 ACGTTTATGGCGAGGAGTTTGAGGCTCTCTATGAGAGTTACGAGAAGGCTGGCAAGGGTC 545487 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | ||| || | ||| ||||| ||| | || | || | || ||||| | Sbjct 545486 GCAAGACCATTAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAGGCGCAAACCGAGACAG 545427 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | | || | ||| | | ||| || | |||| ||| ||||| || |||| | Sbjct 545426 GAAATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGTAACCAAAAGAACCTAG 545367 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | || ||||| || ||||||| ||||| || ||||| || | ||||| ||| Sbjct 545366 GAACTATTCGCAGCTCCAACTTGTGCACGGAGATCGTTGAGTACTCTGCGCCGGATGAGG 545307 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATC 94638 ||||| |||||| ||| || ||| Sbjct 545306 TTGCTTGTTGTAACTTGGCTTCTATC 545281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717968302160