Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq27 100 3e-16 seq11 87.8 2e-12 >seq27 Length=671268 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| || || || || | | | ||||| ||||| |||||||||||| Sbjct 263801 CCACCACGGAGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAA 263860 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| ||||| || || | |||| | ||||||||||| || || Sbjct 263861 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGG 263920 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | |||||| | ||||| || Sbjct 263921 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG-TCGATGGTGTCCGAAGACTCAAC 263979 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||||| || | ||||| || || || || || || || ||||||||| || Sbjct 263980 CTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGACT 264031 >seq11 Length=1281110 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | | ||||||||||||||||||||||| ||| Sbjct 150999 CCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTC 150940 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| |||||||| |||| | || | |||||||||||| || || Sbjct 150939 AAGGTGCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGG 150880 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | || ||| ||||||| ||| Sbjct 150879 ATTCCCTCCTTGTCCTGGATCTTAGACTTAACATTATCAATTGTATCGCTCGACTCGACC 150820 Query 138568 TCGACCGTCAGCGTTTTACCAGT 138590 || | || | || || ||||| Sbjct 150819 TCAAGGGTGATGGTCTTGCCAGT 150797 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || ||||||| | || |||||||| |||||||| || Sbjct 151510 CCACCACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAA 151451 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || ||||||||||| | |||| ||||| |||||||| || || Sbjct 151450 AGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGG 151391 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| | || | |||| | || | ||| || | |||||| || Sbjct 151390 ATTCCCTCCTTGTCT-TGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAAC 151332 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || | ||| || || ||||||||||| Sbjct 151331 CTCCAAAGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496257152025120