Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq27 107 1e-18
seq11 95.1 9e-15
>seq27
Length=671268
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| || | | ||| || || |||||||| || |||||||| |||||||| |||
Sbjct 263801 CCACCACGGAGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAA 263860
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| | | | || || | ||| || |||||| | ||||| |||||||||||| |||
Sbjct 263861 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGG 263920
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
||||| |||||||| || ||| || ||| | || || || || | || ||
Sbjct 263921 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 263980
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | ||| |||||||| || || || || || || || || |||||
Sbjct 263981 TCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027
>seq11
Length=1281110
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| | ||||| || ||||| ||||||||||| || | | | |||||
Sbjct 151492 ACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCATCTTCA 151433
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| |||||| |||||| | || | ||| ||||||||| ||| ||||| |||||||| |
Sbjct 151432 AGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGA 151373
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || |||||| | || || ||||| || || || || || ||||| ||
Sbjct 151372 ATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACCTCCAAAGTGATGGTCTTT 151313
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || | ||| || || ||||| ||||||
Sbjct 151312 CCGGTTAAAGTCTTGACGAAAATCTGCATA 151283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357388315065110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |