Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq27 147 2e-30 seq11 104 2e-17 seq54 84.2 2e-11 >seq27 Length=671268 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || |||||||| || | || ||||||||||| || ||||| ||| Sbjct 263801 CCACCACGGAGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAA 263860 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || || ||||||||| ||||||||||||| || ||||| || Sbjct 263861 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGG 263920 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | |||| |||||||| | ||| || Sbjct 263921 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACC 263980 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| ||| | |||||||| || || || || || || ||||||||| || Sbjct 263981 TCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGACT 264031 >seq11 Length=1281110 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | ||||| || || ||||||||||||||| Sbjct 151282 CCACCGCGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAG 151223 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || || || ||||| ||| ||||||| || || |||||||| || Sbjct 151222 AGGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGA 151163 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || ||| ||| | | |||| ||||| | | || || Sbjct 151162 ATTCCCTCCTTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACC 151103 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103 |||| || | || || ||||| || || || |||| Sbjct 151102 TCGAGCGTGATGGTCTTTCCGGTGAGTGTCTTAACAA 151066 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||||| ||||| || ||||| || |||||||| Sbjct 151510 CCACCACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAA 151451 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || || ||||| |||||| |||| | || || || ||||| || Sbjct 151450 AGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGG 151391 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || || ||| | | |||| ||| |||| ||| || Sbjct 151390 ATTCCCTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACC 151331 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||| | ||| || || ||||||||||| Sbjct 151330 TCCAAAGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | || | ||| | || ||||| |||||||| ||||| || | Sbjct 151000 TCCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACT 150941 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || |||||| ||| || || |||||||| ||| | ||||| ||||| || ||||| || Sbjct 150940 CAAGGTGCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGG 150881 Query 127006 TATGCCCTCCTTGTCCGTGATTTT 127029 || |||||||||||| ||| || Sbjct 150880 GATTCCCTCCTTGTCCTGGATCTT 150857 >seq54 Length=188590 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || || || ||||||||| ||||||| || || || |||||||| || ||||||||| Sbjct 62476 TCCTCAAGTTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTG 62535 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||||| | |||| |||||| | |||||| || | ||| | Sbjct 62536 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATG 62595 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAA 127104 || ||||| || || || || || || Sbjct 62596 GTCTTGCCCGTAAGGGTCTTGACGAA 62621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475495771579040