Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq29 196 6e-45 seq23 95.1 1e-14 >seq29 Length=608615 Score = 196 bits (216), Expect = 6e-45 Identities = 1103/1741 (63%), Gaps = 49/1741 (3%) Strand=Plus/Plus Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623 |||||||| || ||||| | ||| |||||| || | |||||| || | | |||| Sbjct 544412 TAGTACATTCCGGTCTTCAAACCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTG 544471 Query 115624 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 115683 | ||| ||| || |||| | ||||||| ||| |||||||| ||||| || Sbjct 544472 CCCATTGTAGGATCTTTCATGTGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCA 544531 Query 115684 CGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTTCTGTAG 115740 ||||| || ||||| | || || || ||| || | |||||||| ||||| |||| Sbjct 544532 CGATCGGCAGCCATTTGAA-CA-ATTGTTCG-CTGGGAGATTTCCCAAACAGTCTTGTAA 544588 Query 115741 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACC 115800 ||| ||| || ||| |||| || | |||||||||||| || ||||| | | Sbjct 544589 AGGGCCTTGATGTCAGCTGGAATGTTGGGGATATTTTGGATGGATCCACCATCAGCAATG 544648 Query 115801 ATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGC 115860 || | | |||||||| | ||||||||||| || | |||||| | | || Sbjct 544649 ATACGGTTCTTCATATTATCAGACCAGAGACCCATATCGACGAGATCTTTGAGAAGCCAT 544708 Query 115861 TTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTAT 115920 ||||| || || || || || || || | | |||||||| | || || Sbjct 544709 GGGTTGACGACCTGGAATTCTCCAGCAAGAACACGACGCGAGTAGATGTTCGAAGTATAA 544768 Query 115921 GGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCC 115980 || || || || || ||| ||| | |||||||| |||| || || ||||| || || Sbjct 544769 GGTTCGAAACATTCGTTGAAACCAAGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCA 544828 Query 115981 ATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCG 116040 | || || |||||||| || | | || || ||| | | |||||| || Sbjct 544829 ACAAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATCGATTGCTTCAACGAGTCCCAATCC 544888 Query 116041 TAGT--TGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTG 116098 | | || | || | | | ||||||| || | || || ||| | || ||| Sbjct 544889 CACAAATCAG-TAGGTGTAACAC-CCCACATGTCGTATTGAAGTTCACCCTTAGAGACTG 544946 Query 116099 GCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCT 116155 | || || | | | || || ||||| || ||| || | || ||| | | Sbjct 544947 GGGAACCTTGATAAGTTTCGTATGGACCAAGTTCCTTTGCGATCTCAACGGATGAGGTC- 545005 Query 116156 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 116215 | ||| ||||| || || ||||||||||| | || | |||||| ||| | Sbjct 545006 --AAGGCAGCGTGGTAGATAGTCTCAAAAATTTGGATGTTGAGGTGCTTGGCTTCGGGAG 545063 Query 116216 AATCAAACGCGAGACG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 116273 | || || | ||||| | | || ||| |||| || |||||||| ||||||| | Sbjct 545064 AGTCGAATGGAAGACGAAGGGCCAA--AAAAGCATCAGCAAGACCTTGAACACCGACAGC 545121 Query 116274 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATC 116333 || || || || | | ||| ||||| || || || |||||| | || | || Sbjct 545122 GATAGGTCGGTGACGGAAATTGCTCTTTCTCGCTTCCTGAACCGGATAATAGTTGATGTC 545181 Query 116334 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 116393 |||| | | || | |||| | ||||| | || | || |||||||||| | |||| Sbjct 545182 AATAATCTTGTTCAAATTTCTAACAACAACTTGGGTAACCTCGTGAAGCTTTTGGAAATC 545241 Query 116394 AAAACTGCGAGTCTC-TTCA--TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 116450 || ||| ||| |||| || ||| | | || | ||||| || |||| ||||| Sbjct 545242 GTAAGTGC---CCTCATTCATGTTAACAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACA 545298 Query 116451 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 116510 || ||||||| ||| |||||| | || ||||| ||||| || || || Sbjct 545299 ACAAGCAACCTCATCCGGCGCAGAGTACTCAACGATCTCCGTGCACAAGTTGGAGCTGCG 545358 Query 116511 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATA 116570 ||| || || | ||||||||| || ||| |||| || ||||| ||||| ||||| | Sbjct 545359 AATAGTTCCTAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAA 545418 Query 116571 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCA 116629 || | || ||||| ||||| | || |||||||| | ||| | | | | | || Sbjct 545419 AGGATTTCCTGTCTCGGTTTGCGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCT---- 545474 Query 116630 CAGTGGCGTTGGCTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACT 116683 | ||| ||| || |||| ||| |||||| | ||||| |||||||||| Sbjct 545475 TAATGGTCTTG---CGACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCAAACT 545531 Query 116684 CTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGAC 116743 | || || | | |||| | || || | || || || | || | ||| | | Sbjct 545532 CCTCGCCATAAACGTCTGCCAAACCCGGACATTCATTGGGGCACATAAGGGTCCAGTCTC 545591 Query 116744 CACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCC 116803 | || ||||| |||||||||||||| || || ||||| | || |||||||||| | Sbjct 545592 CGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAAGGCATAGAAGAGATCAC 545651 Query 116804 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 116863 | |||| ||||||| | || ||||| || | || | || || | | ||| | Sbjct 545652 GTGCGCGAACTTCTTCCTTACCATGATTCTTGCGTAGATCAAGGAACTCGAAAACATCGG 545711 Query 116864 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTA 116920 | ||||| || || ||||| || || | | || ||| |||| | |||| | Sbjct 545712 CATGCCATGGCTCAAGGTAAACAGCAAAAGCACCAGGGCGCTTGTTACCACCTTGGTCAA 545771 Query 116921 CATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCAT 116980 |||| || || || ||| || || || ||||| |||| || || | || | || | Sbjct 545772 CATATCTGGCGGTGTTGTTGAAAACTCGGAGCATGGGAACAATGCCGTTGGAATTTCCGT 545831 Query 116981 TTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACC 117038 | || || ||| ||| | || | | || | || ||| |||| | ||||||||| Sbjct 545832 TGGTACCGGCGATATA-GGCACCAG-TAGCACGGATTCTGTGAATGTTGAGACCAATACC 545889 Query 117039 CCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 117098 || || ||||||||| || || | | | | || |||| || |||||||| Sbjct 545890 ACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTGTCGTAAATACCATCGATACT 545949 Query 117099 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 117158 || | || | ||||||||||||| || | ||||| | ||| ||||| || Sbjct 545950 ATCTTCTTTCATGTCGATGAGGAAGCACGAAGAAAGTTGTGCCTGTGGGGTACCCGCAGA 546009 Query 117159 GAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCA 117217 |||||| ||||| | || || | || ||| | | ||||| || ||| ||||| | Sbjct 546010 GAAGAGTGTTGGGGAGGCATGTGT-AAAGTACTTGTTTGACATTAAATTGTATGTCTCAA 546068 Query 117218 AGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGG 117277 | || ||| || || ||||||||||| | | || ||||| | ||| | ||| | Sbjct 546069 TGGCACTCTCAATATCATCACCGTGAATACCAACCGCAACACGCATGATCATTTGTTGTG 546128 Query 117278 G 117278 | Sbjct 546129 G 546129 >seq23 Length=743066 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || |||||| || |||||||||||||||||||| || ||||| || || Sbjct 463395 GCAAAGTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCA 463454 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 | ||||||||| |||||||| | |||||| || | || || || |||||||| || Sbjct 463455 GCCATGAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATA 463514 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT-TTGT-ATCAA 127697 || || || ||||| || | ||||| | ||||| || | | | |||| | || Sbjct 463515 CCTTCAACGGCGGCGAAAGCGACGAGACGTTGAGCAAA--AGTAGAATTCTTGTCTTGAA 463572 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||| || | ||||| | ||||| |||| ||| || || || Sbjct 463573 TCCATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 463615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613500712161360