Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq11 111 4e-19 seq3 87.8 4e-12 >seq11 Length=1281110 Score = 111 bits (122), Expect = 4e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||| ||||| | |||||| || || ||||| || | ||||| || | | || Sbjct 151276 CGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTG 151217 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || ||||||||||||||||| | ||| || || || || |||||| Sbjct 151216 CGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCC 151157 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| ||| |||| ||||| | | ||| || || | | Sbjct 151156 TCCTTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGC 151097 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||||| ||||| || ||||| || || |||| Sbjct 151096 GTGATGGTCTTTCCGGTGAGTGTCTTAACAA 151066 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || |||||||| ||||||||||| | |||||||||| ||| || Sbjct 150993 CGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTCAAGGTG 150934 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || || ||||||||||| || | |||||| ||||| || ||||| Sbjct 150933 CGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGGATTCCC 150874 Query 199529 TCTCGCTCCTGAATCTT 199545 || ||||| ||||| Sbjct 150873 TCCTTGTCCTGGATCTT 150857 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||| | ||||||||| | | || || ||||| |||| ||||||||| || ||| Sbjct 151702 TCCTTTTGAATGTTGTAGTCGGAAAGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAAG 151643 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | | ||| ||||| || || || || |||||||||||| ||| || Sbjct 151642 ATCAATCTCTGTTGGTCAGGGGGGATACCCTCCTTATCCTGAATCTTTGACTTGACATTA 151583 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | || |||| | ||| || || || || || ||||| || || | ||| || ||| Sbjct 151582 TCAATAGTATCTGACGATTCAACTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAACA 151523 Query 199619 AAAATTTG 199626 || ||||| Sbjct 151522 AAGATTTG 151515 >seq3 Length=1645291 Score = 87.8 bits (96), Expect = 4e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 98372 TTCCGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGAAACGAAG 98431 ||| || ||||| |||| ||| ||||| | |||||||| | | | | |||||||||| Sbjct 549031 TTCGGCAACCTTTCGGACGTAGTTGTGACGCTTCTCCTCACGAAGACGCGCGAAACGAAG 548972 Query 98432 GGCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGACGTCAAAATTATGAAGAAT 98491 |||||||| || || | ||||| |||||||||||| |||| ||| || || | ||| Sbjct 548971 AGCAGATTGACCACCACGACCGTGCTTCTTTGGCAAATCGACGGAAAACTTGTGGACAAT 548912 Query 98492 TTTCTTGGTGTTCCCA 98507 | ||||||| ||| Sbjct 548911 ATCTCTGGTGTTTCCA 548896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178908821226682