Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq11 111 4e-19
seq3 87.8 4e-12
>seq11
Length=1281110
Score = 111 bits (122), Expect = 4e-19
Identities = 151/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||| ||||| | |||||| || || ||||| || | ||||| || | | ||
Sbjct 151276 CGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTG 151217
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || || ||||||||||||||||| | ||| || || || || ||||||
Sbjct 151216 CGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCC 151157
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| ||| ||| |||| ||||| | | ||| || || | |
Sbjct 151156 TCCTTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGC 151097
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||||| ||||| || ||||| || || ||||
Sbjct 151096 GTGATGGTCTTTCCGGTGAGTGTCTTAACAA 151066
Score = 95.1 bits (104), Expect = 3e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || || |||||||| ||||||||||| | |||||||||| ||| ||
Sbjct 150993 CGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTCAAGGTG 150934
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || || || ||||||||||| || | |||||| ||||| || |||||
Sbjct 150933 CGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGGATTCCC 150874
Query 199529 TCTCGCTCCTGAATCTT 199545
|| ||||| |||||
Sbjct 150873 TCCTTGTCCTGGATCTT 150857
Score = 87.8 bits (96), Expect = 4e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
|||||||| | ||||||||| | | || || ||||| |||| ||||||||| || |||
Sbjct 151702 TCCTTTTGAATGTTGTAGTCGGAAAGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAAG 151643
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558
|| | | ||| ||||| || || || || |||||||||||| ||| ||
Sbjct 151642 ATCAATCTCTGTTGGTCAGGGGGGATACCCTCCTTATCCTGAATCTTTGACTTGACATTA 151583
Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618
|| | || |||| | ||| || || || || || ||||| || || | ||| || |||
Sbjct 151582 TCAATAGTATCTGACGATTCAACTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAACA 151523
Query 199619 AAAATTTG 199626
|| |||||
Sbjct 151522 AAGATTTG 151515
>seq3
Length=1645291
Score = 87.8 bits (96), Expect = 4e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 98372 TTCCGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGAAACGAAG 98431
||| || ||||| |||| ||| ||||| | |||||||| | | | | ||||||||||
Sbjct 549031 TTCGGCAACCTTTCGGACGTAGTTGTGACGCTTCTCCTCACGAAGACGCGCGAAACGAAG 548972
Query 98432 GGCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGACGTCAAAATTATGAAGAAT 98491
|||||||| || || | ||||| |||||||||||| |||| ||| || || | |||
Sbjct 548971 AGCAGATTGACCACCACGACCGTGCTTCTTTGGCAAATCGACGGAAAACTTGTGGACAAT 548912
Query 98492 TTTCTTGGTGTTCCCA 98507
| ||||||| |||
Sbjct 548911 ATCTCTGGTGTTTCCA 548896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178908821226682
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |