Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq27 123 3e-23
seq11 98.7 1e-15
>seq27
Length=671268
Score = 123 bits (136), Expect = 3e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| ||||||| || | || ||| |||||||| ||||||||||| ||||| || |
Sbjct 263812 ACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCC 263871
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || || ||||| || ||||| ||||| ||||| ||||||| || | | ||||||
Sbjct 263872 ATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTT 263931
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| | | | ||||| || || || || | |||||
Sbjct 263932 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 263991
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||||||||| || || || || ||||| |||||
Sbjct 263992 GGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027
>seq11
Length=1281110
Score = 98.7 bits (108), Expect = 1e-15
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||||| || || | | ||| | ||||| ||||| || || |||||||| || |||||
Sbjct 151745 TTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTA 151686
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|||||| || || | | || || | |||||| || || || ||||| | ||| |||||
Sbjct 151685 GTCGGAAAGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTC 151626
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539
| || | | |||||| ||| ||||| ||||| | | | || || |||
Sbjct 151625 AGGGGGGATACCCTCCTTATCCTGAATCTTTGACTTGACATTATCAATAGTATCTGACGA 151566
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || | || || || || || |||| || |||||||||||||||||
Sbjct 151565 TTCAACTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565232422603920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |