Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq23 140 3e-28 seq27 114 1e-20 seq54 107 2e-18 seq11 104 2e-17 >seq23 Length=743066 Score = 140 bits (154), Expect = 3e-28 Identities = 354/530 (67%), Gaps = 10/530 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| ||||| || ||||| || | ||||| || || || || || || | Sbjct 463088 CATGACACCAGCCTTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGC 463147 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 |||||| || | ||| || || || |||||||| | ||||| ||| || || | Sbjct 463148 CAAGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATCTGTAGA-CTTTGT--CGTT 463204 Query 132711 ---CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 ||| ||| ||| || | || || |||||||||||||||||| |||| | | Sbjct 463205 ACCCAGAGCGAGGAGGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGA 463264 Query 132768 ATTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 || | ||||| ||| |||| || || || ||||| | ||| ||||||||| | | Sbjct 463265 GTTCATTCCCAAGAGA-GCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTA 463323 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || ||||||| || || |||| | | || || ||| | ||| || Sbjct 463324 CAGCTTCGGTGATGACATCTTGAACGGATTGCTTGGATGGGCGATGCTTGAGATGGGAGA 463383 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 | | | ||| |||||||| || | ||| ||||| | ||| |||||||||||| || Sbjct 463384 AGAGGAGGCATGCAAAGTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGA 463443 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 |||| | || | |||||| || || || || ||||| || |||| |||||| || | Sbjct 463444 AAGTGAGTCCAGCCATGAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGG 463503 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCTTCT 133065 | ||||| | || || ||||| |||||||| || || || | | || || | |||| Sbjct 463504 AGAAGAAAATACCTTCAACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCT 463563 Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115 | || | ||||| | ||||| |||||||| | |||| ||| || Sbjct 463564 TGTCTTG-AATCCATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 463612 Score = 116 bits (128), Expect = 4e-21 Identities = 191/275 (69%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 || ||||||||||| ||| || |||| ||||| | ||||||||| |||||| || Sbjct 463716 TATGTGTCGATGAGAAGCGAGTATGTTTCAGAGTGAATGTTCTCCATCATGATTTGGAAT 463775 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| | || || | || ||||| | ||| ||||| |||| ||| Sbjct 463776 CCGTAGAAGCATCTTGCTTCTGGGATTTGAACTTCACCACTGAATCGCTCAACCAAGTTT 463835 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 || ||||| || |||||| || ||||| || || || ||||| ||| || | |||| Sbjct 463836 TCATTGACAATTCCGTCGGATGCAGCGAAGAATGCGAGAACGTGGGAGATAAAGTAGCGC 463895 Query 133348 TCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 |||| || || | | | ||||||| | ||||| ||||| || | ||| || Sbjct 463896 TCGTCATCATTGAGTCTGTTGTTCCAGTCGTGTAGATCCTTTGACAGATCAATCTCTTCT 463955 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || || || || || |||||||| Sbjct 463956 GCGGTCCAGAAAGATGCTTCTGCCTTCTTGTACAT 463990 >seq27 Length=671268 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||||||||||||| |||| || ||| | | Sbjct 264027 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 263968 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| |||||||| || |||||||| Sbjct 263967 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 263908 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || || || || || | || || || |||||||||| Sbjct 263907 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 263848 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| || | || || || |||||| | ||| Sbjct 263847 ATCCAAAAAGAGTCCACCCTTCACTTGGTGTTACGT 263812 >seq54 Length=188590 Score = 107 bits (118), Expect = 2e-18 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 38243 AATGCAAATA--TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||| |||| ||||| || || || |||||||| ||||||||| | || |||||| || Sbjct 62633 AATGATAATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCC 62574 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || || |||| ||||| ||||||||||| ||||| Sbjct 62573 TCTGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGAC 62514 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| || | || | ||| || || || || || |||| || || ||| |||||| Sbjct 62513 CAACAACGCTTGATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGACTAC 62454 Query 38421 AACATCCAAAAGG 38433 ||||||||||||| Sbjct 62453 AACATCCAAAAGG 62441 >seq11 Length=1281110 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAA 38327 || ||||| ||||||||| | || |||||| | | ||| | | | | |||| Sbjct 150797 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGAGCGATACAATTGATAATGTTAAGTCT 150856 Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| |||||||| ||| ||||||||||||| | |||| ||| || ||| Sbjct 150857 AAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAA 150916 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 || || || || | |||||| | | ||||||||||| |||||||| | || || ||| Sbjct 150917 CAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCCACTCTCCAT 150976 Query 38448 TTGGTGCTGCGT 38459 | || || ||| Sbjct 150977 CTCGTTCTCCGT 150988 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || |||||||| | || || ||| | | Sbjct 151284 ATGCAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCG 151343 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | || | ||||| || || | ||||| |||||||| || |||||| Sbjct 151344 GATACCATCGATAATG--TAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACC 151401 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || || || | ||| || ||||| || || || | |||||||| || |||| Sbjct 151402 AACAACGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCGGATTACA 151461 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||||| | || | |||||||| || ||| Sbjct 151462 ACATCCAAAAGGAATCTACTTTACATTTGGTCCTTCGT 151499 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 38256 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA- 38314 || || || ||||| || || |||||||| |||| || || | | |||| | | Sbjct 151068 GTTAAGACACTCACCGGAAAGACCATCACGCTCGAGGTTGAATCTTCTGACACTATCGAT 151127 Query 38315 AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCAT 38374 |||| |||| || || | ||||| |||||||||||| |||| ||||| || | || Sbjct 151128 AACG-TTAAGTCGAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTGAT 151186 Query 38375 TTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 | ||| || || || || || || | ||||||||| ||| ||||| || || ||||| Sbjct 151187 CTTCGCCGGAAAGCAACTTGAGGATGGTCGCACCCTCTCCGATTACAATATTCAGAAGGA 151246 Query 38435 AGCGACGCTGCATTTGGTGCT 38455 | | || || || ||||| || Sbjct 151247 ATCTACCCTCCACTTGGTCCT 151267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500167510672640