Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq11 120 1e-21 seq52 109 2e-18 seq54 86.0 2e-11 >seq11 Length=1281110 Score = 120 bits (132), Expect = 1e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 391062 GTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAA 391121 ||||| ||||| || || || || || || || || |||||||| ||||| | || || Sbjct 151068 GTTAAGACACTCACCGGAAAGACCATCACGCTCGAGGTTGAATCTTCTGACACTATCGAT 151127 Query 391122 GCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATT 391181 |||| || |||||||| ||||| |||||||| || |||||||||||||| || Sbjct 151128 AACGTTAAGTCGAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTGATC 151187 Query 391182 TTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGAT 391241 ||| | || || |||||||| ||||| | || | | ||||| |||||| | ||||| Sbjct 151188 TTCGCCGGAAAGCAACTTGAGGATGGTCGCACCCTCTCCGATTACAATATTCAGAAGGAA 151247 Query 391242 GCAACACTTCACTTAGTATTAAGACT 391267 | || || ||||| || | ||||| Sbjct 151248 TCTACCCTCCACTTGGTCCTTAGACT 151273 Score = 102 bits (112), Expect = 3e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || | || || || || || ||| | || ||||| || || Sbjct 151284 ATGCAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCG 151343 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | || || |||||||| ||||| ||||| || || || ||| Sbjct 151344 GATACCATCGATAATGTAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCAA 151403 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || ||||||||||||||||| | || | ||||||| || Sbjct 151404 CAACGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCGGATTACAAC 151463 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 151464 ATCCAAAAGGA 151474 >seq52 Length=201257 Score = 109 bits (120), Expect = 2e-18 Identities = 191/278 (69%), Gaps = 9/278 (3%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || |||| ||||| || || ||||| ||| | ||||| ||||| ||||| |||| Sbjct 160267 ATGCCGTCGTTACCGTTCCAGCATACTTCAACGATTCTCAACGTCAAGCTACTAAGGATG 160208 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || ||||||||||| || || || || || | || || || || || ||||||| Sbjct 160207 CTGGTCAAATTGCTGGTTTGAACGTCCTCAGAGTTGTGAACGAGCCAACTGCTGCTGCTC 160148 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 | || || || | ||| || | || || || || || | |||| Sbjct 160147 TCGCTTACGG-TTTGGAGAAGGA--------TGAGGATAAGGTCATCGCTGTTTACGATT 160097 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | |||||||| || |||| ||| || ||| ||| || | || || || || || | Sbjct 160096 TGGGTGGAGGTACCTTCGATATTTCCGTCCTTGAGATTCAAAAGGGTGTCTTCGAGGTCA 160037 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 | | ||||| |||||||| ||| | |||||||||||| Sbjct 160036 AATCTACCAACGGTGATACCCATTTGGGAGGTGAAGAT 159999 >seq54 Length=188590 Score = 86.0 bits (94), Expect = 2e-11 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112 |||| ||||| || || || || || || || || || ||||| || || || ||||| Sbjct 62627 AATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGAC 62568 Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172 | ||| || | | || || || || || ||||| ||||||||||| || |||||| Sbjct 62567 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAA 62508 Query 391173 CGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214 || || || ||| | || || |||||||| || ||| | ||| Sbjct 62507 CGCTTGATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACT 62466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975696984447368