Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq11 120 1e-21
seq52 109 2e-18
seq54 86.0 2e-11
>seq11
Length=1281110
Score = 120 bits (132), Expect = 1e-21
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 391062 GTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAA 391121
||||| ||||| || || || || || || || || |||||||| ||||| | || ||
Sbjct 151068 GTTAAGACACTCACCGGAAAGACCATCACGCTCGAGGTTGAATCTTCTGACACTATCGAT 151127
Query 391122 GCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATT 391181
|||| || |||||||| ||||| |||||||| || |||||||||||||| ||
Sbjct 151128 AACGTTAAGTCGAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTGATC 151187
Query 391182 TTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGAT 391241
||| | || || |||||||| ||||| | || | | ||||| |||||| | |||||
Sbjct 151188 TTCGCCGGAAAGCAACTTGAGGATGGTCGCACCCTCTCCGATTACAATATTCAGAAGGAA 151247
Query 391242 GCAACACTTCACTTAGTATTAAGACT 391267
| || || ||||| || | |||||
Sbjct 151248 TCTACCCTCCACTTGGTCCTTAGACT 151273
Score = 102 bits (112), Expect = 3e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || | || || || || || ||| | || ||||| || ||
Sbjct 151284 ATGCAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCG 151343
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || | | || || |||||||| ||||| ||||| || || || |||
Sbjct 151344 GATACCATCGATAATGTAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCAA 151403
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||| | || ||| | || ||||||||||||||||| | || | ||||||| ||
Sbjct 151404 CAACGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCGGATTACAAC 151463
Query 391230 ATTGATAAGGA 391240
|| | |||||
Sbjct 151464 ATCCAAAAGGA 151474
>seq52
Length=201257
Score = 109 bits (120), Expect = 2e-18
Identities = 191/278 (69%), Gaps = 9/278 (3%)
Strand=Plus/Minus
Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379
|||| || |||| ||||| || || ||||| ||| | ||||| ||||| ||||| ||||
Sbjct 160267 ATGCCGTCGTTACCGTTCCAGCATACTTCAACGATTCTCAACGTCAAGCTACTAAGGATG 160208
Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439
| || || ||||||||||| || || || || || | || || || || || |||||||
Sbjct 160207 CTGGTCAAATTGCTGGTTTGAACGTCCTCAGAGTTGTGAACGAGCCAACTGCTGCTGCTC 160148
Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499
| || || || | ||| || | || || || || || | ||||
Sbjct 160147 TCGCTTACGG-TTTGGAGAAGGA--------TGAGGATAAGGTCATCGCTGTTTACGATT 160097
Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559
| |||||||| || |||| ||| || ||| ||| || | || || || || || |
Sbjct 160096 TGGGTGGAGGTACCTTCGATATTTCCGTCCTTGAGATTCAAAAGGGTGTCTTCGAGGTCA 160037
Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597
| | ||||| |||||||| ||| | ||||||||||||
Sbjct 160036 AATCTACCAACGGTGATACCCATTTGGGAGGTGAAGAT 159999
>seq54
Length=188590
Score = 86.0 bits (94), Expect = 2e-11
Identities = 116/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112
|||| ||||| || || || || || || || || || ||||| || || || |||||
Sbjct 62627 AATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGAC 62568
Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172
| ||| || | | || || || || || ||||| ||||||||||| || ||||||
Sbjct 62567 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAA 62508
Query 391173 CGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACT 391214
|| || || ||| | || || |||||||| || ||| | |||
Sbjct 62507 CGCTTGATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACT 62466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975696984447368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |