Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq11 224 7e-53 seq1 136 3e-26 seq5 113 3e-19 seq52 102 6e-16 >seq11 Length=1281110 Score = 224 bits (248), Expect = 7e-53 Identities = 933/1454 (64%), Gaps = 31/1454 (2%) Strand=Plus/Plus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 || || |||||||| | ||| |||||||| ||||||||||| || || | | |||||| Sbjct 236717 ATTCCGTTGGCATCAAGATCGAATGTGACCTCAATTTGAGGAACACCACGTGGTGCAGGT 236776 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | ||| | |||| | || || || || ||| || || ||| Sbjct 236777 GGGATACCAGTGAGCTCGAATTTACCCAAAAGGTTGTTGTCCTTGGTGCGTTGACGCTCA 236836 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||||| | |||||| || ||| ||| || || || | || | || || | Sbjct 236837 CCCTCGAAGACTTGGATGAGGACACCAGGTTGGTTGTCAGAGAAGGTGGAGAAGACCTCG 236896 Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 || || || || || || |||||||| || | |||||||| ||||| || Sbjct 236897 GACTTCTTGGTGGGGATGGTGGTGTTTCTTGGGATGAGCTTGGTCATCTGTCCACCAGCA 236956 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 517571 || || | ||| ||||| | || | |||||| | |||| || | || | | || Sbjct 236957 GTCTCGATACCGAGAGACAATGGGGCGACATCGAGAAGGAGGATCTCGTTGGTGGACTTG 237016 Query 517572 CATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 | | || | |||| ||| ||||| || || | |||||||| ||||||||||| ||| Sbjct 237017 GAGGAAGTGTCACCAGAAAGGATAGCAGCCTGGACGGCAGCACCGTATGCAACAGCCTCA 237076 Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT- 517689 || || || | | | ||| | | ||||| ||||| | | | | || | ||| Sbjct 237077 TCGGGGTTGATGGACTTGTTTGGCTCCTTACCGTTGAAGTAGTCGGTGATGAGCT-TCTG 237135 Query 517690 --TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC-CTGTGATTT 517746 ||| | || ||||||| || || ||||| | || || || || || ||| ||||| Sbjct 237136 GATACGT--GGGATACGAGTGGAACCACCAACGAGGACGATCTCGTGGACTCTG-GATTT 237192 Query 517747 ATCCAGTTTTGAATC--CAATAAAACTTTTTCAACGGG-----TTCAAGACCCGCTCTAA 517799 || | || | ||| ||| | || | | || || | ||| | | | Sbjct 237193 GTCAATCTTGGCATCGGCAAGGACACGGT--CGACTGGGGTGGTGGTAGAACGG-----A 237245 Query 517800 ACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTC 517859 | | ||| |||||||| ||||| ||| | || | | | | |||| || | Sbjct 237246 AGAGGTCCTGGCAAAGTTCCTCGAAACGAGCACGGGTGATGGAGGTGTAGAAATCGATAC 237305 Query 517860 CTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAG 517919 | ||||| | ||| |||| ||||| | ||||||| || || || || | ||| |||| Sbjct 237306 CCTCGAAGAGAGAGTCAATCTCAATAGAGGTTTGAGCAGATGAGGAGAGGGTACGCTTAG 237365 Query 517920 CACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT-TCAAATCTGTT 517978 |||| || || || || | || | || | || || | | || |||||||| | Sbjct 237366 CACGCTCGCAAGCAGTGCGGAGACGACGGAGAGCACGAGC-GTTGGAGCTCAAATCTTTC 237424 Query 517979 TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCA 518038 || | |||| |||||| || || | | || ||||| || ||||| || ||| Sbjct 237425 TTGTGCTTTCGCTTGAATTCGCTTACGAAGTGGTTGACGAGACGGTTGTCAAAGTCCTCA 237484 Query 518039 CCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGAC 518098 || ||||| | ||| | || | || | | || | ||| | || || || | | | Sbjct 237485 CCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCCTCCTCGATGGTC 237544 Query 518099 AAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTG 518158 || |||| |||||| |||||| ||||| | ||| || || || || || || Sbjct 237545 AAGAGAGAGACATCAAAGGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGCTCACCC 237604 Query 518159 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218 || || || || | ||| || |||| |||||| || || ||||| || || || | Sbjct 237605 TCAATCTTCTTGTCCAAACCGTAAGCAATAGCAGCTGCGGTAGGTTCGTTGATGATACGG 237664 Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278 | || |||||||||||||| || || || || || ||||| | |||||||||| | Sbjct 237665 AGGACGTTAAGACCAGCAATGAGACCAGCGTCCTTGGTAGCTTGACGTTGTGAATCGGTG 237724 Query 518279 AAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCC 518338 || || || || || || | ||||| | | || | ||||| ||||| || Sbjct 237725 AAGTAAGCTGGGACTGTGACGACGGCGTTGTTGACAGTTCCACCAAGGTAAGCCTCAGCA 237784 Query 518339 GTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGAT 518398 || | | |||| || || ||||| || || |||| |||||| | |||||||| Sbjct 237785 GTCTCTCTCATCTTGACCAAGATCATGGAAGAGATTTCTTCTGGTGTGAATTGCTTGTTC 237844 Query 518399 TC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGG 518457 || |||| | || |||| ||| || || | || || || ||||| Sbjct 237845 TCGCCCTTGA-ACTCGACCTCAATGACTGGCTTTCCGGCACGGTCAACGACCTTGAATGG 237903 Query 518458 CCAGTATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGTT 518516 ||| |||||||| | |||||| || || || || | | |||||| || || | Sbjct 237904 GAAGTGCTTCATATCGGCTTGAAC-CTCAGGATCTGCGAACTTGCGACCAATCAAACGCT 237962 Query 518517 TTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAA 518576 | ||||| || | || ||| |||| || || || |||||| ||||| ||||| || | Sbjct 237963 TCGCATCGAAGACGGTGTTGATTGGGTTCATGGCGACTTGATTCTTGGCAGCATCACCGA 238022 Query 518577 TCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCAT 518636 ||||| | || || ||||| || | ||| | ||||| || || || || ||||| || | Sbjct 238023 TCAGACGCTCGGTATCTGTGAAAGCAACGAAGGATGGGGTGGTTCGGTTTCCTTGGTCGT 238082 Query 518637 TCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTA 518696 | || |||||||| | | || | | | | | ||| || || | || || || | Sbjct 238083 TGGCGATAATTTCGATTCTATCGTCACGGAAGATACCCACGCAGGAGTAGGTGGTACCCA 238142 Query 518697 AATCAATACCAATA 518710 |||| ||||||||| Sbjct 238143 AATCGATACCAATA 238156 >seq1 Length=3180511 Score = 136 bits (150), Expect = 3e-26 Identities = 173/234 (74%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 ||||| ||||| ||||||||| || | |||||||||||||||||||||||||| | ||| Sbjct 858575 TTAAG-GGTAAGGAAGGTCGTCTTCGTGGAAATTTGATGGGAAAACGTGTCGACTTTTCT 858517 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 || ||||| ||||||||| |||||||||| || |||| |||| ||||||||||||| Sbjct 858516 GCTCGTACCGTTATTACTGGTGATCCCAATCTTTCTCTAGATGAGGTTGGTGTTCCTCGA 858457 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTTG 669028 | ||||| | || || || | | || | || ||| || || || || | ||| Sbjct 858456 AGCATTGCGAGAATCCTCACCTATCCGGAGACCGTTACACCACTCAACATCGATAAGTTG 858397 Query 669029 ACTCAATTAGTGAAAAATGGTAAAAGA-GTATATCCGGGTGCCAATTTTGTAAT 669081 ||| | || |||||||| | ||| | |||| |||||||| | ||| || Sbjct 858396 CATCAGCTCGTTAAAAATGG-ACCAGATGAGCATCCCGGTGCCAAATATGTCAT 858344 >seq5 Length=1611257 Score = 113 bits (124), Expect = 3e-19 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 366982 AAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTT 367041 || ||| || ||||||| || || ||||||||||||||||| ||| | || | ||||||| Sbjct 53471 AATATACAAGTTGTAGTTGCAACGATAGCATTTGGTATGGGCATTGACAAGCAGGATGTT 53412 Query 367042 AGAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGT 367101 || |||| ||||||||| | ||| |||| | | |||||||| ||||| |||| ||| Sbjct 53411 CGATTTGTCATTCATTATTGCCTTCCTAAGACTTTGGAAGGTTACTATCAGGAAACTGGA 53352 Query 367102 AGAGCAGGTCGTGATGG 367118 |||| || || ||||| Sbjct 53351 CGAGCGGGCCGAGATGG 53335 >seq52 Length=201257 Score = 102 bits (112), Expect = 6e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || | ||| || || | ||||||||||||||| || || | || ||| | || || Sbjct 160129 TTCTCCAAACCGTAAGCGAGAGCAGCAGCAGTTGGCTCGTTCACAACTCTGAGGACGTTC 160188 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | |||||||||| || ||||| ||||| ||||| | ||| |||||||| || ||||| Sbjct 160189 AAACCAGCAATTTGACCAGCATCCTTAGTAGCTTGACGTTGAGAATCGTTGAAGTATGCT 160248 Query 518288 GGAACAGTAATAACGGCAT 518306 ||||| |||| ||||||| Sbjct 160249 GGAACGGTAACGACGGCAT 160267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780780418693276