Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq29 203 4e-47 seq3 114 2e-20 seq23 96.9 4e-15 seq2 87.8 2e-12 >seq29 Length=608615 Score = 203 bits (224), Expect = 4e-47 Identities = 1119/1759 (64%), Gaps = 77/1759 (4%) Strand=Plus/Plus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 |||||| || ||||| ||||| ||||| ||||||||| || ||||| | || ||| Sbjct 544498 GTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTT----GA-ACA 544552 Query 109560 CTT-TTGGCTA----ATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATG 109614 || || ||| |||||||| ||||||||||| | |||||| ||| | |||||| Sbjct 544553 ATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 544612 Query 109615 TCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTT 109670 | ||| ||||| || || |||||| ||| || ||| | | |||||| | | Sbjct 544613 TTGGGGATATTTTGGATGGATCCACCA----TCAGCAATGATACGGTTCTTCATATTATC 544668 Query 109671 CGACCAGAGACCGACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAAT 109728 ||||||||||| | | |||||| | | ||| ||| |||||| || ||| Sbjct 544669 AGACCAGAGACCCATATCGACGAGATCTTTGAGAAGCCATGG--GTTGACGACCTGGAAT 544726 Query 109729 TCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTG 109788 || |||||||| || || ||||||||| | || || ||||||||||| || ||| Sbjct 544727 TCTCCAGCAAGAACACGACGCGAGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTG 544786 Query 109789 TTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGG 109848 || |||||||| | ||| ||| || ||||| || || | || ||| ||| ||| Sbjct 544787 AAACCAAGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGG 544846 Query 109849 AGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAAT--T 109906 | || | ||| | | | || | ||||||||| |||| |||| Sbjct 544847 ATTCCGTGTTGCTTGATCGATTGCTTCAACGAGTCCCAATC-------CCAC-AAATCAG 544898 Query 109907 TAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGA 109966 ||| | || ||||||| || ||||||| |||||| || | || ||| |||||| Sbjct 544899 TAGGTGTAACACCCCACATGTCGTATTGAAGTTCACCCTTAGAGACTGGGGAA-CCTTGA 544957 Query 109967 -AACTCTCGTACGACCCCTCAACCTCGGCCAACT---CGGATGAAGCCTCTAGTGCCGCA 110022 || | ||||| | || ||| || | || ||||||| | || || || || Sbjct 544958 TAAGTTTCGTATGGACCAAGTTCCTTTGCGATCTCAACGGATGAGG--TCAAG-GCAGCG 545014 Query 110023 TGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTC---ACAGTCGAAG 110079 || || |||||||||||||| || | ||||| | |||| | ||||||| Sbjct 545015 TGGTAGATAGTCTCAAAAATTTG---GATGTTGAGGTGCTTGGCTTCGGGAGAGTCGAAT 545071 Query 110080 GGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGA 110139 ||||||| | | ||| |||| || ||||| |||||||||| | | || || || Sbjct 545072 GGAAGACGAAGGGCCAAAAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGG 545131 Query 110140 TGCTTCATGTTAGAGCGTCGAGCAGTTTCT--ACGGGGTAAAAGTTGCGGTCGATGACCC 110197 || | || || || || || || || ||| ||||| ||| || | | Sbjct 545132 TGACGGAAATTGCTCTTTCTCGC--TTCCTGAACCGGATAATAGTTGATGTCAATAATCT 545189 Query 110198 GATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTT 110257 || | ||| | ||| | || | || || || || | | ||||| | || Sbjct 545190 TGTTCAAATTTCTAACAACAACTTGGGTAACCTCGTGAAGCTTTTGGAAATCGTAAGTGC 545249 Query 110258 TCGTCTCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCT 110317 | | | | || ||| | | || | ||| ||||| || | || || || | || Sbjct 545250 CCTCATTCATGTTAACAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCT 545309 Query 110318 CGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCA 110377 | || | | ||| || | || ||||| ||||||||||| || ||| || | Sbjct 545310 CATCCGGCGCAGAGTACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTA 545369 Query 110378 AGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAG 110437 |||||| || || || |||||||||||| || || |||||| | || | || | Sbjct 545370 GGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTG 545429 Query 110438 TTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGC---GGGGACAGTTGCG 110493 | || || || | || |||||| | | ||| | | | | | | || | ||||| Sbjct 545430 TCTCGGTTTGCGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGTC--TTGCG 545487 Query 110494 TTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACA 110553 | | || ||| |||||| | || | ||||||| |||| || || || Sbjct 545488 --ACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACG 545545 Query 110554 TCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACC 110613 || | | |||| | | ||| || | |||| ||| | ||| || ||||| Sbjct 545546 TCTGCCAAACCCGGACATTCATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACA 545605 Query 110614 CTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCT 110673 | ||||||||| || ||||||||||||| || |||| || ||||| ||| | ||| Sbjct 545606 CGCTTCATGAAGAGATCAGGAATCCACAAGGCATAGAAGAGATCACGTGCGCGAACTTCT 545665 Query 110674 TCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCG 110733 || | ||| || || |||||| || | || || | | ||| | |||||||| || Sbjct 545666 TCCTTACCATGATTCTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCA 545725 Query 110734 AGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCT 110787 || || ||||| | | || | | || ||| | |||| |||||| | || Sbjct 545726 AGGTAAACAGCAAAAGCACC---AGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCG 545782 Query 110788 GTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTA 110847 ||| ||||| || | |||||| |||| ||| || | ||| | || || ||||| Sbjct 545783 GTGTTGTTGAAAACTCGGAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCG 545842 Query 110848 ATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTA 110907 || || | | ||||| || ||| || | | |||||||||||| || ||| Sbjct 545843 ATATAGGCACCAGTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTT 545902 Query 110908 CTAATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTT 110966 || |||| | ||| | | || | ||||||||||| || |||| | || | Sbjct 545903 GAGATCATGGCACAAATCT-TCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCAT 545961 Query 110967 GGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 | | || || ||||| ||||| | || | | || || |||||| ||||||||| || Sbjct 545962 GTCGATGAGGAAGCACGAAGAAAGTTGTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGG 546021 Query 111027 TGTCGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT 111084 | ||||| || | || |||| ||||| |||||||| || | || Sbjct 546022 GGAGGCATG--TGTAAAGTACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCA 546079 Query 111085 ACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTTTCGAT 111143 | ||| | |||||||||||||| ||||| ||||||| ||| | ||| || |||| | Sbjct 546080 ATATCATCACCGTGAATACCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTG-- 546137 Query 111144 TAGCTTT-CCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATC 111202 | |||| ||||| | ||| ||||||| ||| || ||||||| ||| |||||| Sbjct 546138 CAACTTTGCCATCGAGACGTAGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATT 546197 Query 111203 CAAAATCGAAATCACGATC 111221 | | |||||| ||||| Sbjct 546198 GGTAGTTGAAATCTCGATC 546216 >seq3 Length=1645291 Score = 114 bits (126), Expect = 2e-20 Identities = 281/417 (67%), Gaps = 23/417 (6%) Strand=Plus/Plus Query 11506 TCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGCA 11565 ||||||||||| || || | ||||| | ||||| | ||| | ||| ||| | ||| Sbjct 704069 TCGAAACGACCAGGTCGCATGAGAGCCTTGTCAAGTACGTCGGGTCTGTTAGTACCAGCA 704128 Query 11566 ATGACTACAAT--GC-CAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 | || ||||| || |||| |||| ||||||||||| || || | | || ||| Sbjct 704129 AGAACAACAATTTGCTCAGTTGTATTG---AAACCGTCCATCTCAGTCAATATTTGATTG 704185 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGG-----GCATA-CCACC-----TGCCGAACGCT 11671 | ||| ||| || |||||||| | | | ||||| |||| ||| Sbjct 704186 AGCGTAGCTTCCCGTTCATCGTTTCCACCTCCCGAAAATCCACCGGACTTGCC--ACGAG 704243 Query 11672 TCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCT 11731 ||| |||| ||| ||||||||||| ||||||| ||||||||| | | |||| Sbjct 704244 ACTTTCCGATAGCATCAATCTCATCAATGAATATGATACACGGAGTACTCTTTCTTGCCA 704303 Query 11732 GTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG 11791 | ||||| || || || | | ||||||||||| |||||||||||||| || | | Sbjct 704304 TGGCAAAAAGGTCCCGAACTCTCGATGCTCCAACACCCACGAACATCTCAACAAACTCGG 704363 Query 11792 --CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAG 11849 | || ||||||||| ||| ||||| | || ||||| || | || || || | Sbjct 704364 AACCGC-TAACACTGAA-GAATGGAACTTGGGATTCACCTGCCGTTGCCTTTGCCAGTAA 704421 Query 11850 AGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC 11906 ||| ||||| ||||| |||| |||| | || |||||||| || || || ||||| Sbjct 704422 AGTTTTACCAGTACCTGGTGGTCCAGATAAAATAGCGCCACGTGGAATTTTAGCACC 704478 >seq23 Length=743066 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || ||||| || || |||||||| || || ||| ||||||| |||||| || Sbjct 463407 TGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCCATGAGACCA 463466 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| || ||| || ||||| || || || || | Sbjct 463467 CGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCTTCAACGGCG 463526 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTC--GAA-CCACTTGAGAGCC 119684 |||||||||| ||||| | |||||||| | |||||| ||| ||| |||| |||| Sbjct 463527 GCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATCCATTTGACAGCC 463586 Query 119685 CAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 |||| |||||| || ||||| || || Sbjct 463587 CAGTCGGCCTTCTTCTTGATGCAAGGAAC 463615 >seq2 Length=1995478 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 1939206 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 1939265 Query 136777 GGGAACAGCTT 136787 | || || ||| Sbjct 1939266 GTGATCATCTT 1939276 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 1946845 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 1946786 Query 136777 GGGAACA 136783 | || || Sbjct 1946785 GTGATCA 1946779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588969771578800