Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq23 111 2e-19 >seq23 Length=743066 Score = 111 bits (122), Expect = 2e-19 Identities = 177/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 153774 TTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 153833 ||||| |||| | || ||||| ||||| || ||||| |||||||| | |||||| Sbjct 415721 TTTGGAGTTCCATTTGGTTATGGTGGTCCACACGCTGCCTTCTTTGCTGTTAGCGACAAG 415780 Query 153834 TATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAA 153893 || ||||||||||| || ||| | | | ||| || || || ||| | || Sbjct 415781 TACAAGAGAAAGATTCCAGGCCGTCTCATTGGTATTTCGAAGGACAGACTAGGGGACAAG 415840 Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953 ||| ||||||| ||||| || ||||| || || || | ||||| || || || ||| Sbjct 415841 GCAATGCGATTAGCTCTACAAACCAGAGAACAACACATTCGCAGAGAAAAGGCCACTAGT 415900 Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCAT 154013 || | ||||| ||||| ||| || |||| || ||| || |||||||||| || ||| Sbjct 415901 AATGTGTGCACGGCTCAAGCATTGTTGGCCAACATGAGTGCGTTCTATGCAGTTTACCAT 415960 Query 154014 GGTGCAGATGGACT 154027 || |||| || || Sbjct 415961 GGACCAGAAGGCCT 415974 Score = 109 bits (120), Expect = 6e-19 Identities = 265/395 (67%), Gaps = 15/395 (4%) Strand=Plus/Plus Query 154719 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATG 154778 || ||||| || | || || |||||||| || |||||| |||| |||||||| ||| Sbjct 416732 TGCTTGATTCCTGTTTCTGCCCATGGAACCAACCCTGCTTCAGCTGCTATGGCAGGTATG 416791 Query 154779 AAAGTTGTAGGTGTCAAGTGTGA--TGATGA-TGGTAACATAGACATCAAAGATCT---A 154832 ||||| ||| |||||||| | | | |||||| | ||||| ||||| | Sbjct 416792 CGTGTTGTTACTGTGAAGTGTGACATCAAGTCTGGTAATCTCGACATGGCCGATCTCAAA 416851 Query 154833 GAGAAGAA--AGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCAT 154890 | ||| || ||| ||| ||||| | || ||||| || || ||| Sbjct 416852 GCCAAGTGTGAGAAAT-----ATAGCGAAGAACTTGGAGCGATCATGATCACGTATCCAA 416906 Query 154891 CTACACATGGTGTATTTGAAACTAACATTA-GACAGATATGTAAGATCGTTCATGACAAT 154949 ||| |||||| || || || | || | | | | |||| | || |||||| | || Sbjct 416907 GTACTTTTGGTGTGTTCGAGCCTGAAATCAAGGCTGC-ATGTGACATTGTTCATCAGCAT 416965 Query 154950 GGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCA 155009 |||||||| || || | || || || || | || || || ||||| || ||| Sbjct 416966 GGTGGTCAAGTCTACATGGACGGCGCCAACATGAACGCTCAAATAGGATTATGTTCACCT 417025 Query 155010 TGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACAT 155069 ||||| |||||| |||||||| ||||| ||| | || ||||| || |||||||| ||| Sbjct 417026 GGTGAGATTGGTGCCGATGTATGCCATCTTAACCTTCACAAAACGTTTTGTATTCCTCAT 417085 Query 155070 GGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||||| || || || || || || || ||||| Sbjct 417086 GGAGGTGGTGGACCCGGTGTTGGCCCAATTGGTGT 417120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579206674824640