Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq23 111 2e-19
>seq23
Length=743066
Score = 111 bits (122), Expect = 2e-19
Identities = 177/254 (70%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 153774 TTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 153833
||||| |||| | || ||||| ||||| || ||||| |||||||| | ||||||
Sbjct 415721 TTTGGAGTTCCATTTGGTTATGGTGGTCCACACGCTGCCTTCTTTGCTGTTAGCGACAAG 415780
Query 153834 TATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGTAATAAA 153893
|| ||||||||||| || ||| | | | ||| || || || ||| | ||
Sbjct 415781 TACAAGAGAAAGATTCCAGGCCGTCTCATTGGTATTTCGAAGGACAGACTAGGGGACAAG 415840
Query 153894 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGT 153953
||| ||||||| ||||| || ||||| || || || | ||||| || || || |||
Sbjct 415841 GCAATGCGATTAGCTCTACAAACCAGAGAACAACACATTCGCAGAGAAAAGGCCACTAGT 415900
Query 153954 AACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCAT 154013
|| | ||||| ||||| ||| || |||| || ||| || |||||||||| || |||
Sbjct 415901 AATGTGTGCACGGCTCAAGCATTGTTGGCCAACATGAGTGCGTTCTATGCAGTTTACCAT 415960
Query 154014 GGTGCAGATGGACT 154027
|| |||| || ||
Sbjct 415961 GGACCAGAAGGCCT 415974
Score = 109 bits (120), Expect = 6e-19
Identities = 265/395 (67%), Gaps = 15/395 (4%)
Strand=Plus/Plus
Query 154719 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATG 154778
|| ||||| || | || || |||||||| || |||||| |||| |||||||| |||
Sbjct 416732 TGCTTGATTCCTGTTTCTGCCCATGGAACCAACCCTGCTTCAGCTGCTATGGCAGGTATG 416791
Query 154779 AAAGTTGTAGGTGTCAAGTGTGA--TGATGA-TGGTAACATAGACATCAAAGATCT---A 154832
||||| ||| |||||||| | | | |||||| | ||||| ||||| |
Sbjct 416792 CGTGTTGTTACTGTGAAGTGTGACATCAAGTCTGGTAATCTCGACATGGCCGATCTCAAA 416851
Query 154833 GAGAAGAA--AGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCAT 154890
| ||| || ||| ||| ||||| | || ||||| || || |||
Sbjct 416852 GCCAAGTGTGAGAAAT-----ATAGCGAAGAACTTGGAGCGATCATGATCACGTATCCAA 416906
Query 154891 CTACACATGGTGTATTTGAAACTAACATTA-GACAGATATGTAAGATCGTTCATGACAAT 154949
||| |||||| || || || | || | | | | |||| | || |||||| | ||
Sbjct 416907 GTACTTTTGGTGTGTTCGAGCCTGAAATCAAGGCTGC-ATGTGACATTGTTCATCAGCAT 416965
Query 154950 GGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCA 155009
|||||||| || || | || || || || | || || || ||||| || |||
Sbjct 416966 GGTGGTCAAGTCTACATGGACGGCGCCAACATGAACGCTCAAATAGGATTATGTTCACCT 417025
Query 155010 TGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACAT 155069
||||| |||||| |||||||| ||||| ||| | || ||||| || |||||||| |||
Sbjct 417026 GGTGAGATTGGTGCCGATGTATGCCATCTTAACCTTCACAAAACGTTTTGTATTCCTCAT 417085
Query 155070 GGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
|||||||| || || || || || || || |||||
Sbjct 417086 GGAGGTGGTGGACCCGGTGTTGGCCCAATTGGTGT 417120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579206674824640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |