Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq23 113 5e-20 >seq23 Length=743066 Score = 113 bits (124), Expect = 5e-20 Identities = 266/395 (67%), Gaps = 15/395 (4%) Strand=Plus/Plus Query 159394 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATG 159453 || ||||| || | || || |||||||| || ||||| ||||| | |||||||| ||| Sbjct 416732 TGCTTGATTCCTGTTTCTGCCCATGGAACCAACCCTGCTTCAGCTGCTATGGCAGGTATG 416791 Query 159454 AAAGTTGTAGGTGTCAAGTGTGA--TGATGA-TGGCAACATAGACATCAAAGATCT---A 159507 ||||| ||| |||||||| | | | ||| || | ||||| ||||| | Sbjct 416792 CGTGTTGTTACTGTGAAGTGTGACATCAAGTCTGGTAATCTCGACATGGCCGATCTCAAA 416851 Query 159508 GAGAAGAA--AGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCAT 159565 | ||| || ||| ||| ||||| | || ||||| || |||||| Sbjct 416852 GCCAAGTGTGAGAAAT-----ATAGCGAAGAACTTGGAGCGATCATGATCACGTATCCAA 416906 Query 159566 CTACACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAGATTGTTCATGAGAAT 159624 ||| |||||| || || | | |||| | | | |||| | ||||||||| || || Sbjct 416907 GTACTTTTGGTGTGTTCGAGCCTGAAATCAAGGCTGC-ATGTGACATTGTTCATCAGCAT 416965 Query 159625 GGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCA 159684 |||||||| || || | || || || || | || || || |||| || ||| Sbjct 416966 GGTGGTCAAGTCTACATGGACGGCGCCAACATGAACGCTCAAATAGGATTATGTTCACCT 417025 Query 159685 TGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACAT 159744 |||| |||||| |||||||| ||||| ||| | || || || || |||||||| ||| Sbjct 417026 GGTGAGATTGGTGCCGATGTATGCCATCTTAACCTTCACAAAACGTTTTGTATTCCTCAT 417085 Query 159745 GGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||||||| || || || || || || |||||||| Sbjct 417086 GGAGGTGGTGGACCCGGTGTTGGCCCAATTGGTGT 417120 Score = 111 bits (122), Expect = 2e-19 Identities = 177/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 158449 TTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 158508 ||||| |||| | || || || ||||| || ||||| |||||||| | |||||| Sbjct 415721 TTTGGAGTTCCATTTGGTTATGGTGGTCCACACGCTGCCTTCTTTGCTGTTAGCGACAAG 415780 Query 158509 TATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAA 158568 || ||||||||||| || ||| | | | ||| || || || ||| | || Sbjct 415781 TACAAGAGAAAGATTCCAGGCCGTCTCATTGGTATTTCGAAGGACAGACTAGGGGACAAG 415840 Query 158569 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGT 158628 ||| ||||||| ||||| || ||||| || || || | ||||| || || || ||| Sbjct 415841 GCAATGCGATTAGCTCTACAAACCAGAGAACAACACATTCGCAGAGAAAAGGCCACTAGT 415900 Query 158629 AACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCAT 158688 || | ||||| || |||||| || |||| || ||| || ||||||||||| || ||| Sbjct 415901 AATGTGTGCACGGCTCAAGCATTGTTGGCCAACATGAGTGCGTTCTATGCAGTTTACCAT 415960 Query 158689 GGTGCAGATGGACT 158702 || |||| || || Sbjct 415961 GGACCAGAAGGCCT 415974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588044981358560