Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq23 113 5e-20
>seq23
Length=743066
Score = 113 bits (124), Expect = 5e-20
Identities = 266/395 (67%), Gaps = 15/395 (4%)
Strand=Plus/Plus
Query 159394 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATG 159453
|| ||||| || | || || |||||||| || ||||| ||||| | |||||||| |||
Sbjct 416732 TGCTTGATTCCTGTTTCTGCCCATGGAACCAACCCTGCTTCAGCTGCTATGGCAGGTATG 416791
Query 159454 AAAGTTGTAGGTGTCAAGTGTGA--TGATGA-TGGCAACATAGACATCAAAGATCT---A 159507
||||| ||| |||||||| | | | ||| || | ||||| ||||| |
Sbjct 416792 CGTGTTGTTACTGTGAAGTGTGACATCAAGTCTGGTAATCTCGACATGGCCGATCTCAAA 416851
Query 159508 GAGAAGAA--AGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCAT 159565
| ||| || ||| ||| ||||| | || ||||| || ||||||
Sbjct 416852 GCCAAGTGTGAGAAAT-----ATAGCGAAGAACTTGGAGCGATCATGATCACGTATCCAA 416906
Query 159566 CTACACATGGTGTATTTGAAACAAACATCA-GACAGATATGTAAGATTGTTCATGAGAAT 159624
||| |||||| || || | | |||| | | | |||| | ||||||||| || ||
Sbjct 416907 GTACTTTTGGTGTGTTCGAGCCTGAAATCAAGGCTGC-ATGTGACATTGTTCATCAGCAT 416965
Query 159625 GGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCA 159684
|||||||| || || | || || || || | || || || |||| || |||
Sbjct 416966 GGTGGTCAAGTCTACATGGACGGCGCCAACATGAACGCTCAAATAGGATTATGTTCACCT 417025
Query 159685 TGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACAT 159744
|||| |||||| |||||||| ||||| ||| | || || || || |||||||| |||
Sbjct 417026 GGTGAGATTGGTGCCGATGTATGCCATCTTAACCTTCACAAAACGTTTTGTATTCCTCAT 417085
Query 159745 GGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
|||||||| || || || || || || ||||||||
Sbjct 417086 GGAGGTGGTGGACCCGGTGTTGGCCCAATTGGTGT 417120
Score = 111 bits (122), Expect = 2e-19
Identities = 177/254 (70%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 158449 TTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 158508
||||| |||| | || || || ||||| || ||||| |||||||| | ||||||
Sbjct 415721 TTTGGAGTTCCATTTGGTTATGGTGGTCCACACGCTGCCTTCTTTGCTGTTAGCGACAAG 415780
Query 158509 TATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAA 158568
|| ||||||||||| || ||| | | | ||| || || || ||| | ||
Sbjct 415781 TACAAGAGAAAGATTCCAGGCCGTCTCATTGGTATTTCGAAGGACAGACTAGGGGACAAG 415840
Query 158569 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGT 158628
||| ||||||| ||||| || ||||| || || || | ||||| || || || |||
Sbjct 415841 GCAATGCGATTAGCTCTACAAACCAGAGAACAACACATTCGCAGAGAAAAGGCCACTAGT 415900
Query 158629 AACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCAT 158688
|| | ||||| || |||||| || |||| || ||| || ||||||||||| || |||
Sbjct 415901 AATGTGTGCACGGCTCAAGCATTGTTGGCCAACATGAGTGCGTTCTATGCAGTTTACCAT 415960
Query 158689 GGTGCAGATGGACT 158702
|| |||| || ||
Sbjct 415961 GGACCAGAAGGCCT 415974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588044981358560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |