Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq27 140 7e-28 seq11 132 1e-25 seq54 107 4e-18 >seq27 Length=671268 Score = 140 bits (154), Expect = 7e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 || || | |||||| |||||||||||||| || ||||| |||| |||||| | ||||| Sbjct 263816 AACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 263875 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || || ||||| || |||||||| | ||| |||||||| || || || || || ||||| Sbjct 263876 TCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCC 263935 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || || || |||||| || || |||||||||||| || || || ||||| | || Sbjct 263936 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTT 263995 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | || || ||||| | ||||| Sbjct 263996 TTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027 >seq11 Length=1281110 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || || ||||| || |||||||| | ||| || | |||||||| || || ||||| Sbjct 151481 AGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCATCTTCAAGTTGTTTACC 151422 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 ||||||||||| ||||||||||| || || || || || ||||||||||| || ||| Sbjct 151421 AGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGAATCTTAGACTT 151362 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || || || ||||| ||||| || || || | || | |||||||| || ||||| Sbjct 151361 TACATTATCGATGGTATCCGACGACTCAACCTCCAAAGTGATGGTCTTTCCGGTTAAAGT 151302 Query 195123 TTTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 151301 CTTGACGAAAATCTGCAT 151284 Score = 125 bits (138), Expect = 2e-23 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | || | ||| || || || || || |||||||||||||||| || || | Sbjct 151273 AGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGA 151214 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || || ||||| || |||||||| | |||||||| || || ||||| || || Sbjct 151213 CCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCC 151154 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||||||||| || ||| ||||| || || ||||| ||| ||| || || || || Sbjct 151153 TTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGTG 151094 Query 195103 ACCGTCTTTCCTGT 195116 | |||||||| || Sbjct 151093 ATGGTCTTTCCGGT 151080 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/190 (71%), Gaps = 8/190 (4%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAGTTCTCCCATCTT 194989 ||| || || ||||||||||| |||||||| ||||| || |||| || | ||||| | Sbjct 150982 AACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTCAAG-GTGCGACCATCCT 150924 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 | || || || || ||||| || | || |||||||| || || || || || ||||| | Sbjct 150923 CAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCT 150864 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCG 195106 | || || ||| || || ||||| || || ||| || || |||||||| | | Sbjct 150863 GGATCTTAGACTTAACATTATCAATTGTATCGCTCGA---CTCGACCTCAAGGGTGATGG 150807 Query 195107 TCTTTCCTGT 195116 |||| || || Sbjct 150806 TCTTGCCAGT 150797 >seq54 Length=188590 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 ||||| || ||||| || | ||||| | || || || || ||||| || |||||||| Sbjct 62443 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 62502 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | ||||||||||| |||||||| || || ||||| || || || |||||| || || Sbjct 62503 AAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 62562 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||||||| || || || |||||||| | ||||| || || | || || ||||| Sbjct 62563 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 62621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109469573912882