Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq27 140 7e-28
seq11 132 1e-25
seq54 107 4e-18
>seq27
Length=671268
Score = 140 bits (154), Expect = 7e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988
|| || | |||||| |||||||||||||| || ||||| |||| |||||| | |||||
Sbjct 263816 AACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 263875
Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
|| || ||||| || |||||||| | ||| |||||||| || || || || || |||||
Sbjct 263876 TCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCC 263935
Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108
|| || || |||||| || || |||||||||||| || || || ||||| | ||
Sbjct 263936 TGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTT 263995
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | || || ||||| | |||||
Sbjct 263996 TTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027
>seq11
Length=1281110
Score = 132 bits (146), Expect = 1e-25
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002
||| || || ||||| || |||||||| | ||| || | |||||||| || || |||||
Sbjct 151481 AGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCATCTTCAAGTTGTTTACC 151422
Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062
||||||||||| ||||||||||| || || || || || ||||||||||| || |||
Sbjct 151421 AGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGAATCTTAGACTT 151362
Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122
|| || || ||||| ||||| || || || | || | |||||||| || |||||
Sbjct 151361 TACATTATCGATGGTATCCGACGACTCAACCTCCAAAGTGATGGTCTTTCCGGTTAAAGT 151302
Query 195123 TTTTACGAACACTTGCAT 195140
|| ||||| | |||||
Sbjct 151301 CTTGACGAAAATCTGCAT 151284
Score = 125 bits (138), Expect = 2e-23
Identities = 144/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||| | || | ||| || || || || || |||||||||||||||| || || |
Sbjct 151273 AGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGA 151214
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| || || ||||| || |||||||| | |||||||| || || ||||| || ||
Sbjct 151213 CCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCC 151154
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||||||||| || ||| ||||| || || ||||| ||| ||| || || || ||
Sbjct 151153 TTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGTG 151094
Query 195103 ACCGTCTTTCCTGT 195116
| |||||||| ||
Sbjct 151093 ATGGTCTTTCCGGT 151080
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/190 (71%), Gaps = 8/190 (4%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAGTTCTCCCATCTT 194989
||| || || ||||||||||| |||||||| ||||| || |||| || | ||||| |
Sbjct 150982 AACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTCAAG-GTGCGACCATCCT 150924
Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049
| || || || || ||||| || | || |||||||| || || || || || ||||| |
Sbjct 150923 CAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCT 150864
Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCG 195106
| || || ||| || || ||||| || || ||| || || |||||||| | |
Sbjct 150863 GGATCTTAGACTTAACATTATCAATTGTATCGCTCGA---CTCGACCTCAAGGGTGATGG 150807
Query 195107 TCTTTCCTGT 195116
|||| || ||
Sbjct 150806 TCTTGCCAGT 150797
>seq54
Length=188590
Score = 107 bits (118), Expect = 4e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
||||| || ||||| || | ||||| | || || || || ||||| || ||||||||
Sbjct 62443 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 62502
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
| ||||||||||| |||||||| || || ||||| || || || |||||| || ||
Sbjct 62503 AAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 62562
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|||||||| || || || |||||||| | ||||| || || | || || |||||
Sbjct 62563 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 62621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109469573912882
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |