Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq27 109 4e-19 seq11 93.3 3e-14 >seq27 Length=671268 Score = 109 bits (120), Expect = 4e-19 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||||| ||| ||||| || ||||| ||||| ||||| | || |||| Sbjct 263816 AACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 263875 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || || || ||||| || || || | ||| || ||||| | || | ||||||||||| Sbjct 263876 TCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCC 263935 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTAT 34945 ||||| ||||| || | ||||| | ||| | |||||| |||| ||| || Sbjct 263936 TGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 263991 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||| ||||| || ||||| || ||||||||||| Sbjct 263992 GGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027 >seq11 Length=1281110 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || || ||||| || ||||||||| | || |||| || || ||||| || || || Sbjct 151475 TTCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAA 151416 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || ||||| ||||| | || | ||||||||||| |||||| || || | Sbjct 151415 GATAAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGAATCTTAGACTTTAC--A 151358 Query 34910 TGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | ||||||| | ||| | |||||| || | || ||||| ||||| || | ||||| Sbjct 151357 T--TATCGATGGTATCCGACGACTCAACCTCCAAAGTGATGGTCTTTCCGGTTAAAGTCT 151300 Query 34966 TCACAAAGATCTGCATA 34982 | || || ||||||||| Sbjct 151299 TGACGAAAATCTGCATA 151283 Score = 86.0 bits (94), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 8/203 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || ||| |||||||| || || || || ||| | || |||| || Sbjct 151264 ACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCCTCA 151205 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || |||||||| || || | ||||| || || | || | ||||||||||| | Sbjct 151204 AGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGA 151145 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| || || | ||||||| ||| | ||||| |||| || ||||| Sbjct 151144 ATCTTCGACTTAAC----GTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGTGATGGT 151089 Query 34949 TTTTCCCGTGAGAGTCTTCACAA 34971 ||||| ||||| ||||| |||| Sbjct 151088 CTTTCCGGTGAGTGTCTTAACAA 151066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324630252824688