Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq27 109 4e-19
seq11 93.3 3e-14
>seq27
Length=671268
Score = 109 bits (120), Expect = 4e-19
Identities = 156/216 (72%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|| |||||||||| ||| ||||| || ||||| ||||| ||||| | || ||||
Sbjct 263816 AACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 263875
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|| || || ||||| || || || | ||| || ||||| | || | |||||||||||
Sbjct 263876 TCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCC 263935
Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTAT 34945
||||| ||||| || | ||||| | ||| | |||||| |||| ||| ||
Sbjct 263936 TGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 263991
Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|||||| ||||| || ||||| || |||||||||||
Sbjct 263992 GGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027
>seq11
Length=1281110
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/197 (72%), Gaps = 8/197 (4%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| || || ||||| || ||||||||| | || |||| || || ||||| || || ||
Sbjct 151475 TTCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAA 151416
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || ||||| ||||| | || | ||||||||||| |||||| || || |
Sbjct 151415 GATAAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGAATCTTAGACTTTAC--A 151358
Query 34910 TGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965
| ||||||| | ||| | |||||| || | || ||||| ||||| || | |||||
Sbjct 151357 T--TATCGATGGTATCCGACGACTCAACCTCCAAAGTGATGGTCTTTCCGGTTAAAGTCT 151300
Query 34966 TCACAAAGATCTGCATA 34982
| || || |||||||||
Sbjct 151299 TGACGAAAATCTGCATA 151283
Score = 86.0 bits (94), Expect = 4e-12
Identities = 141/203 (69%), Gaps = 8/203 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || ||| |||||||| || || || || ||| | || |||| ||
Sbjct 151264 ACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCCTCA 151205
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|| || |||||||| || || | ||||| || || | || | ||||||||||| |
Sbjct 151204 AGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGA 151145
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
|||||| || || | ||||||| ||| | ||||| |||| || |||||
Sbjct 151144 ATCTTCGACTTAAC----GTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGTGATGGT 151089
Query 34949 TTTTCCCGTGAGAGTCTTCACAA 34971
||||| ||||| ||||| ||||
Sbjct 151088 CTTTCCGGTGAGTGTCTTAACAA 151066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324630252824688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |