Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq29 141 1e-28
seq23 98.7 1e-15
>seq29
Length=608615
Score = 141 bits (156), Expect = 1e-28
Identities = 492/762 (65%), Gaps = 12/762 (2%)
Strand=Plus/Plus
Query 47991 TTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATG 48050
||||| ||||| || ||||||||||| ||||| |||| || || | || | || |
Sbjct 545390 TTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCTCGAGA 545449
Query 48051 ATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCT----TTATTATCATGTTC 48106
||||| | ||||| | |||||| || | ||| || || | | | ||
Sbjct 545450 ATAGAGTACCAAAGCTTTTGAGCCTTAAT----GGTCTTGCGACCCTTGCCAGCCTTCTC 545505
Query 48107 GTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTC 48166
||| | ||| | |||||| || || ||||| || | | || || ||||||||
Sbjct 545506 GTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGGACATTC 545565
Query 48167 ATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGG 48226
||| || ||||| | | ||| || | | |||| || | |||| || | ||| ||
Sbjct 545566 ATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAGATCAGG 545625
Query 48227 TATCCAAAGAGCTATA-AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTT 48285
||||| | || ||| || | ||| | | | | |||||| || ||| |||| |
Sbjct 545626 AATCCACAAGGC-ATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGATTCTTGC 545684
Query 48286 TAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACAC 48345
|| ||||| || || | | ||| ||||||||||| || | || | || | |||
Sbjct 545685 GTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCAC 545744
Query 48346 CTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACA 48405
| || || || ||||| ||||| || | ||||||||| || ||||| |||||| | ||
Sbjct 545745 CAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCA 545804
Query 48406 TTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTA 48465
| || ||||| || || || | || ||||| || | ||||| ||| |||| | |
Sbjct 545805 TGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCACGGA 545864
Query 48466 TATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAA 48525
| | ||| | ||| |||||||| || | || || || | ||||| || |
Sbjct 545865 TTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCA 545924
Query 48526 GGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACA 48585
|| || ||||| || || |||||||| ||| |||| | | || || || ||| |
Sbjct 545925 AAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAGAAA 545984
Query 48586 TTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCT 48645
||| | || || || | | || | |||||| || ||||| |||| | || |
Sbjct 545985 GTTGTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAGTACTTGT 546044
Query 48646 CTGATAACAATTTATATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATA 48704
||| | || || ||||| ||||| || || ||||| || | || ||||| |
Sbjct 546045 TTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TGAATACCAACC 546103
Query 48705 GATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTG 48746
| |||||||| | ||| | ||| || | ||| ||| ||||
Sbjct 546104 GCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTG 546145
>seq23
Length=743066
Score = 98.7 bits (108), Expect = 1e-15
Identities = 180/261 (69%), Gaps = 7/261 (3%)
Strand=Plus/Plus
Query 19259 TTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTA 19318
|||| || ||||| || || || || || |||||||| || ||||||||||||| |
Sbjct 463741 TTTCAGAGTGAATGTTCTCCATCATGATTTGGAATCCGTAGAAGCATCTTGCTTCTGGGA 463800
Query 19319 TCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTG 19378
| || ||||||| || |||| || ||||| |||||||| || ||||| || || |
Sbjct 463801 TTTGAACTTCACCACTGAATCGCTCAACCAAGTTTTCATTGACAATTCCGTCGGATGCAG 463860
Query 19379 CAAAAAATGCTAATACATGTTTAATAAAAT---GTTTTTCATC--TGAGGTTAATGTATT 19433
| || ||||| | || || ||||| | | | ||||| |||| | || ||
Sbjct 463861 CGAAGAATGCGAGAACGTGGGAGATAAAGTAGCGCTCGTCATCATTGAGTCTGTTG--TT 463918
Query 19434 CCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGC 19493
||| || | | ||| || || | ||| | ||||| | ||||| ||||| || |||||
Sbjct 463919 CCAGTCGTGTAGATCCTTTGACAGATCAATCTCTTCTGCGGTCCAGAAAGATGCTTCTGC 463978
Query 19494 TTTTTTATACATGTTCCATAT 19514
|| || ||||| | ||| ||
Sbjct 463979 CTTCTTGTACATCTGCCAGAT 463999
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020
|||||||| ||| || || || ||||| | || | ||| || || || || |
Sbjct 463392 CATGCAAAGTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGT 463451
Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080
|||| ||| || || | || || | |||||| || || || || ||||| || |||||
Sbjct 463452 CCAGCCATGAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAA 463511
Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140
|||||||| || || || ||||| || || | || || || ||| || || | |||
Sbjct 463512 ATACCTTCAACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGA 463571
Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTT 19172
|||||||| | ||||| || |||||||| ||
Sbjct 463572 ATCCATTTGACAGCCCAGTCGGCCTTCTTCTT 463603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562102855699440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |