Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq23 178 2e-39
seq29 98.7 2e-15
>seq23
Length=743066
Score = 178 bits (196), Expect = 2e-39
Identities = 357/522 (68%), Gaps = 23/522 (4%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
||||| || || ||||| ||||| |||||||| ||||| || |||| ||||| ||||||
Sbjct 463104 TGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTCC 463163
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGG 47959
|||||| ||| ||||||| | | || || |||| || | | | || |||
Sbjct 463164 ATGAAGTCGAATGGGTTGGCAGATCTGTAGACTT-TGTCGTTACC--CAGAGCGAGGAGG 463220
Query 47960 TGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016
|| || || ||| |||||||||||| |||||| ||| |||||| || | |||
Sbjct 463221 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGA 463280
Query 48017 GACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075
| ||| | || ||||| || | ||| || | ||| || | || ||||| | |
Sbjct 463281 G-CACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGAC 463339
Query 48076 CTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCAT------AGAGCAT 48129
| | |||| || | | || | || || | |||||| || |||| |
Sbjct 463340 ATCTTGAACG---GATT-----GCTTGGATGGGC-GATGCTTGAGATGGGAGAAGAGGAG 463390
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
||| |||||||| |||| | ||||||||| ||| |||||| |||||||||| |||
Sbjct 463391 GCATGCAAAGTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAG 463450
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249
|||| ||||| || | || || |||||||| || | ||||| || || ||||||||
Sbjct 463451 TCCAGCCATGAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAA 463510
Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309
|| || || || || ||||| ||| ||| | | | |||| || |||||||||
Sbjct 463511 AATACCTTCAACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTG 463570
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||||| | |||||||| ||||||||||||||||| ||
Sbjct 463571 AATCCATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 463612
>seq29
Length=608615
Score = 98.7 bits (108), Expect = 2e-15
Identities = 233/349 (67%), Gaps = 5/349 (1%)
Strand=Plus/Plus
Query 213779 GGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGAC 213838
||| ||||| ||| ||||||| |||| | | || | || |||||| || || || |
Sbjct 545569 GGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAAT 545628
Query 213839 CCACAGCGCGGTGAACAGGTCCC-TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCA 213897
||||| || ||| || || | || | || || ||| ||| || ||||| |
Sbjct 545629 CCACAAGGCATAGAAGAGATCACGTGCGCGAACT-TCTTCCTTACCATGATTCTTGCGTA 545687
Query 213898 GATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG 213957
|||| || || || || | || || ||||| ||||| | ||| | ||||| || || |
Sbjct 545688 GATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCACCAG 545747
Query 213958 GCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGG 214014
| | |||| || || ||||| || ||||| ||||||| | || || | ||
Sbjct 545748 GGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATGG 545807
Query 214015 GTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGT 214074
| || | |||||||| | ||||||||| || || ||||| | || | || | |
Sbjct 545808 GAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCACGGATTC 545867
Query 214075 TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123
|| ||| ||| || || |||||||| | ||| ||||||||||| ||
Sbjct 545868 TGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACA 545916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931522949040640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |