Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq23 178 2e-39 seq29 98.7 2e-15 >seq23 Length=743066 Score = 178 bits (196), Expect = 2e-39 Identities = 357/522 (68%), Gaps = 23/522 (4%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || ||||| ||||| |||||||| ||||| || |||| ||||| |||||| Sbjct 463104 TGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTCC 463163 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGG 47959 |||||| ||| ||||||| | | || || |||| || | | | || ||| Sbjct 463164 ATGAAGTCGAATGGGTTGGCAGATCTGTAGACTT-TGTCGTTACC--CAGAGCGAGGAGG 463220 Query 47960 TGA---TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || || || ||| |||||||||||| |||||| ||| |||||| || | ||| Sbjct 463221 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGA 463280 Query 48017 GACACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 | ||| | || ||||| || | ||| || | ||| || | || ||||| | | Sbjct 463281 G-CACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGAC 463339 Query 48076 CTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCAT------AGAGCAT 48129 | | |||| || | | || | || || | |||||| || |||| | Sbjct 463340 ATCTTGAACG---GATT-----GCTTGGATGGGC-GATGCTTGAGATGGGAGAAGAGGAG 463390 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| |||||||| |||| | ||||||||| ||| |||||| |||||||||| ||| Sbjct 463391 GCATGCAAAGTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAG 463450 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 |||| ||||| || | || || |||||||| || | ||||| || || |||||||| Sbjct 463451 TCCAGCCATGAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAA 463510 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 || || || || || ||||| ||| ||| | | | |||| || ||||||||| Sbjct 463511 AATACCTTCAACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTG 463570 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| | |||||||| ||||||||||||||||| || Sbjct 463571 AATCCATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 463612 >seq29 Length=608615 Score = 98.7 bits (108), Expect = 2e-15 Identities = 233/349 (67%), Gaps = 5/349 (1%) Strand=Plus/Plus Query 213779 GGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGAC 213838 ||| ||||| ||| ||||||| |||| | | || | || |||||| || || || | Sbjct 545569 GGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAAT 545628 Query 213839 CCACAGCGCGGTGAACAGGTCCC-TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCA 213897 ||||| || ||| || || | || | || || ||| ||| || ||||| | Sbjct 545629 CCACAAGGCATAGAAGAGATCACGTGCGCGAACT-TCTTCCTTACCATGATTCTTGCGTA 545687 Query 213898 GATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG 213957 |||| || || || || | || || ||||| ||||| | ||| | ||||| || || | Sbjct 545688 GATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCACCAG 545747 Query 213958 GCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGG 214014 | | |||| || || ||||| || ||||| ||||||| | || || | || Sbjct 545748 GGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATGG 545807 Query 214015 GTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGT 214074 | || | |||||||| | ||||||||| || || ||||| | || | || | | Sbjct 545808 GAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCACGGATTC 545867 Query 214075 TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 || ||| ||| || || |||||||| | ||| ||||||||||| || Sbjct 545868 TGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACA 545916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931522949040640