Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq23 136 7e-27 >seq23 Length=743066 Score = 136 bits (150), Expect = 7e-27 Identities = 337/512 (66%), Gaps = 9/512 (2%) Strand=Plus/Minus Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT-CAACAGCCAGAGCGCTACGTTT 25872 ||||||||| |||||| ||||| | || ||||| ||| | | ||| |||| ||| Sbjct 463608 GCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGA-CAAGAATTCTACTTTT 463550 Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 | | || || || || || || || || || || || || ||| ||| || || || Sbjct 463549 GCTCAACGTCTCGTCGCTTTCGCCGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCC 463490 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCT 25991 ||||||||||||| ||| || || |||| | || || ||||| |||||||| || Sbjct 463489 TCCATCTTCTGGCTTAAGAAGCGTGGTCTCATGGCTGGACTC-ACTTTCTCCAACGAACT 463431 Query 25992 CATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTT 26051 |||| | | ||||| || ||||||| || ||||| ||||| |||| | | | | Sbjct 463430 CATCTCCCGTGACGAAGGCCTCCACACTGACTTTGCATGCCTCCTCTTCTCCCATCTCAA 463371 Query 26052 GCTCCACAAACCTTCTCAAGAGA-CCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCG 26110 || | | || || |||| | |||| | | |||||| || ||||| || |||| Sbjct 463370 GCATCGC---CCATC-CAAGCAATCCGTTCAAGATGTCATCACCGAAGCTGTAGAAATCG 463315 Query 26111 AGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCA 26170 || | || ||| |||| |||||| || |||| Sbjct 463314 AGCAAGAATTTTTGACCGAGGCTCTTCCATGTGCTCTCTTGGGAATGAACTCCACTCTCA 463255 Query 26171 TGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGAC 26230 ||| |||||||| |||| || || || | ||| || | ||||| || || | Sbjct 463254 TGAAGCAATACATCGAGTTCGTTGCTGATCGTCTCCTCCTCGCTCTGGGTAACGACAAAG 463195 Query 26231 TCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCA 26290 ||||||| | | ||||| |||||||| ||||| || || || |||| || ||||||| Sbjct 463194 TCTACAGATCTGCCAACCCATTCGACTTCATGGAGAATATCTCCTTGGCTGGCAAGACCA 463135 Query 26291 ACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 ||||||| || ||||| || ||||| || ||| Sbjct 463134 ACTTCTTCGAGAAGAGAGTTGGCGATTACCAA 463103 Score = 86.0 bits (94), Expect = 1e-11 Identities = 179/266 (67%), Gaps = 7/266 (3%) Strand=Plus/Minus Query 25470 CAAAGATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGAT 25529 |||| | || ||| |||||||||||||||| || || ||||||||| |||||||| Sbjct 464006 CAAACAGATCTGGCAGATGTACAAGAAGGCAGAAGCATCTTTCTGGACCGCAGAAGAGAT 463947 Query 25530 TGATCTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCAT 25584 ||||||| | ||||| | ||| |||| || ||| || | ||||||| | Sbjct 463946 TGATCTGTCAAAGGATCTACACGACTGGAACAACAGACTCAAT--GATGACGAGCGCTAC 463889 Query 25585 TTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTG 25644 ||| || |||| | |||||||| || || || || || || || || || || || Sbjct 463888 TTTATCTCCCACGTTCTCGCATTCTTCGCTGCATCCGACGGAATTGTCAATGAAAACTTG 463829 Query 25645 TGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAG 25704 ||| |||||| | ||||| || | || || | || |||||||| ||||| Sbjct 463828 GTTGAGCGATTCAGTGGTGAAGTTCAAATCCCAGAAGCAAGATGCTTCTACGGATTCCAA 463769 Query 25705 ATGGCCATCGAAAATGTGCACTCTGA 25730 || || || || | |||||||| Sbjct 463768 ATCATGATGGAGAACATTCACTCTGA 463743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928834977466240