Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq11 141 6e-28 seq52 91.5 1e-12 seq1 89.7 3e-12 seq54 87.8 1e-11 >seq11 Length=1281110 Score = 141 bits (156), Expect = 6e-28 Identities = 363/548 (66%), Gaps = 6/548 (1%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| ||||| || || || ||| || || | | | | | | | || | | Sbjct 238155 ATTGGTATCGATTTGGGTACCACCTACTCCTGCGTGGGTATCTTCCGTGACGATAGAATC 238096 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| || ||||| |||||||| || |||| || ||||| | ||| |||| || || Sbjct 238095 GAAATTATCGCCAACGACCAAGGAAACCGAACCACCCCATCCTTCGTTGCTTTCACAGAT 238036 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || | ||| || || |||||||| || |||||| || || || | || || Sbjct 238035 ACCGAGCGTCTGATCGGTGATGCTGCCAAGAATCAAGTCGCCATGAACCCAATCAACACC 237976 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | || ||||| || | ||||||||||| || || | ||| | || ||| | ||| Sbjct 237975 GTCTTCGATGCGAAGCGTTTGATTGGTCGCAAGTTCGCAGATCCTGAGGTTCAAGCCGAT 237916 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629 ||| || | || || ||||| | | || || || ||| || || | | Sbjct 237915 ATGAAGCACTTCCCATTCAAGGTCGTTGACCGTGCCGGAAAGCCAGTCATTGAGGTCGAG 237856 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || || | || ||||| |||| ||| |||| ||||| ||| | || | || Sbjct 237855 TTCAAG--GGCGAGAACAAGCAATTCACACCAGAAGAAATCTCTTCCATGATCTTGGTCA 237798 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 | |||| | | || || ||| | || ||||| | || | | || || | || Sbjct 237797 AGATGAGAGAGACTGCTGAGG-CTTACCTTGGTGGAACTGTCAACAACGCCGTCGTCACA 237739 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || ||||| || || | ||||| ||||||||||| || || || || || ||||| Sbjct 237738 GTCCCAGCTTACTTCACCGATTCACAACGTCAAGCTACCAAGGACGCTGGTCTCATTGCT 237679 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 |||||||| || | ||||| || || ||||| || ||||| || ||||||| ||| | Sbjct 237678 GGTCTTAACGTCCTCCGTATCATCAACGAACCTACCGCAGCTGCTATTGCTTACGGTTTG 237619 Query 474869 GATAAGAA 474876 || ||||| Sbjct 237618 GACAAGAA 237611 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || | ||| | ||| ||| || | || ||||| | || || Sbjct 151505 ACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGT 151446 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | |||||||||||| || ||||| || |||||||||||||| || || || ||||| Sbjct 151445 GCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCC 151386 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||||||||| || ||| || || ||||| | | | || | ||| Sbjct 151385 CTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACCTCCAA 151326 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| | |||||| |||||||| || Sbjct 151325 -AGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTG 151287 Score = 98.7 bits (108), Expect = 6e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| |||||||||||||| || || || | |||||||||||| || |||||||| ||||| Sbjct 151211 ATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTT 151152 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||||||||| || || || ||||| |||| | | || || || || Sbjct 151151 GTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGTGAT 151092 Query 480737 AGTTTTACCGGTGAGAGTCTTAAC 480760 || || |||||||| |||||||| Sbjct 151091 GGTCTTTCCGGTGAGTGTCTTAAC 151068 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || | || ||||| || || || || || | || || Sbjct 151733 ACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAGTCGGAAAGTGT 151674 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| ||| || | |||||||| ||||| || | | ||||| ||||| || || || Sbjct 151673 TCTACCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGGGGGATACC 151614 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||| || ||||||||| |||||| ||||||||||| | | | ||| | Sbjct 151613 CTCCTTATCCTGAATCTTTGACTTGACATTATCAATAGTATCTGACGATTCAACTTCTAA 151554 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || | ||||||||| || ||||| Sbjct 151553 TGTAATTGTCTTCCCAGTCAAAGTCTTAACAAAGATTTG 151515 >seq52 Length=201257 Score = 91.5 bits (100), Expect = 1e-12 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || |||| ||||||||||| || || ||||||||||||||||| ||||| |||| Sbjct 160267 ATGCCGTCGTTACCGTTCCAGCATACTTCAACGATTCTCAACGTCAAGCTACTAAGGATG 160208 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || |||||| ||| | || || | | || | || || ||||| || || || | Sbjct 160207 CTGGTCAAATTGCTGGTTTGAACGTCCTCAGAGTTGTGAACGAGCCAACTGCTGCTGCTC 160148 Query 474855 TTGCTTATGGTCTTGATAAGAAT 474877 | ||||| ||| | || ||| || Sbjct 160147 TCGCTTACGGTTTGGAGAAGGAT 160125 >seq1 Length=3180511 Score = 89.7 bits (98), Expect = 3e-12 Identities = 113/154 (73%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 474717 TTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAA 474775 |||| ||||||| | | | || || || ||||||||||| || || || || ||| Sbjct 1326168 TTGGGCAAGAAGGTCTCAAAGGCCGTTATCACTGTTCCAGCTTACTTCAACGACAACCAA 1326109 Query 474776 CGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAAT 474835 |||||||| || || ||||| || ||||| |||||||| || | ||||| || || Sbjct 1326108 CGTCAAGCTACCAAGGATGCTGGTGCCATTGCCGGTCTTAACGTCCTCCGTATCATCAAC 1326049 Query 474836 GAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 ||||| || || || || ||||||| ||||||| Sbjct 1326048 GAACCTACCGCTGCTGCCATTGCTTACGGTCTTG 1326015 >seq54 Length=188590 Score = 87.8 bits (96), Expect = 1e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || ||||||||||||||||| || || | |||||||| || ||||||||||| |||||| Sbjct 62476 TCCTCAAGTTGCTTTCCAGCGAAGATCAAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTG 62535 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 || || ||||| |||||| || || || |||| | |||||||| || Sbjct 62536 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATG 62595 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAA 480763 || || || || || ||||| ||||| Sbjct 62596 GTCTTGCCCGTAAGGGTCTTGACGAA 62621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268142910955208