Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq11 127 4e-24 seq27 86.0 1e-11 >seq11 Length=1281110 Score = 127 bits (140), Expect = 4e-24 Identities = 173/238 (73%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCT--CTTTAGAAATAT 193182 |||||| |||||| | | || || |||| ||||| || || | |||| ||| | | Sbjct 151747 ATTTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGT-GCTTTCCTTTTGAA-TGT 151690 Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242 | |||||||| | |||||| ||| || || || ||||| ||||| || |||||||||| Sbjct 151689 TGTAGTCGGAAAGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGTT 151630 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 | ||||| || || || || ||||| || || || | || | ||| ||||||||| | Sbjct 151629 GGTCAGGGGGGATACCCTCCTTATCCTGAATCTTTGACTTGACATTATCAATAGTATCTG 151570 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || |||||||||| || || || || || || | || || ||||| |||||||| Sbjct 151569 ACGATTCAACTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512 >seq27 Length=671268 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || |||||||| | || | ||| || | ||| ||||| || || || |||| | Sbjct 263846 ATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGC 263905 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 ||||| || || || ||||| || || || || || |||| || | ||| || || Sbjct 263906 TGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTG 263965 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || ||||||||||| || || || || ||||| || || || || || || || || ||| Sbjct 263966 TCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGC 264025 Query 193359 AT 193360 || Sbjct 264026 AT 264027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899644886154720