Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq11 136 8e-27 >seq11 Length=1281110 Score = 136 bits (150), Expect = 8e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || ||||||||||||| || || ||| || ||||| Sbjct 151513 ATACCACCACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCC 151454 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | |||||||||||| ||||| | | ||||| || ||| Sbjct 151453 GAAAGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGT 151394 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||| || || ||||| || ||| ||||||||| || | ||| ||||| || Sbjct 151393 GGGATTCCCTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCA 151334 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| ||||| || || ||||| || || | || |||||||| Sbjct 151333 ACCTCCAAAGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284 Score = 134 bits (148), Expect = 3e-26 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCA 192366 |||||| | |||||| | || || || || || || | |||| || || || || || Sbjct 151739 ACCACCACGAAGACGGAGCACCAAGTGCAAGGT-GCTTTCCTTTTGA-ATGTTGTAGTCG 151682 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| |||| ||||| || || || |||||||| ||||||||||| ||||| Sbjct 151681 GAAAGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGG 151622 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || ||||| || || || || |||||| |||| |||||||||||| Sbjct 151621 GGGATACCCTCCTTATCCTGAATCTTTGACTTGACATTATCAATAGTATCTGACGATTCA 151562 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||||| || || ||||| || || |||| ||| || ||||| Sbjct 151561 ACTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984469328852100