Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq29 165 2e-35
seq1 104 7e-17
seq16 98.7 3e-15
>seq29
Length=608615
Score = 165 bits (182), Expect = 2e-35
Identities = 568/879 (65%), Gaps = 15/879 (2%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || || ||||| ||||| ||| || || || || |||| ||||| |||||
Sbjct 545323 GTACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTT 545382
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
| || |||| || ||||| ||||| || ||| | || |||||||||| | || ||
Sbjct 545383 ACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGC 545442
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809
|| ||||| ||| || | | || ||||| |||| |||| ||
Sbjct 545443 CTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGTCTTGCGACCCTTGCCAGCCTT 545502
Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867
||| || | ||||| | ||| | | ||||| || ||| || || || ||
Sbjct 545503 CTCGTAACTCTCATAGAGAGCCTCAA--ACTCCTCGCCATAAACGTCTGCCAAACCCGGA 545560
Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATA 155925
|| | || |||||| | || | ||| | || | || ||||||| ||| || |
Sbjct 545561 CATTCATTGGGGCACATAAGGGTCCAGTCTCCGTT--CTTTTCAACACGCTTCATGAAGA 545618
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985
|||| ||| | |||||||| || || | ||| || || | || ||||
Sbjct 545619 GATCAGGAATCCACAAGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGAT 545678
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
|||| ||||| || | ||| || || ||| | ||| |||||| || || | |||||
Sbjct 545679 TCTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAA 545738
Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
|| |||| | |||| ||||| || || ||||| | || || || ||||| || |
Sbjct 545739 AAGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTC 545798
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162
||||| |||| ||| || |||||| | || ||||| ||| |||| | ||||| |
Sbjct 545799 GGAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAG 545858
Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT--TTAGAAATTTGAGCGCA 156220
|| | | ||||| | || ||||||||||| | ||| || || || || ||
Sbjct 545859 CACGGATTCTGTGAATGTTGAGACCAATACCACCGG--CATTCTTTGAGATCATGGCACA 545916
Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280
||| | ||| | | ||||||| || ||| ||| |||| ||| | || ||||
Sbjct 545917 AATCTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCA 545976
Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340
|||| | ||| | |||| || || || ||| ||||| || | ||||| ||||
Sbjct 545977 CGAAGAAAGTTGTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAA 546036
Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAAT 156400
||||| || ||||| ||| ||||||||| | |||||| || | ||||||||
Sbjct 546037 GTACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCGTGAAT 546096
Query 156401 ACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCG 156460
|| | | || | ||| ||| || || ||||| ||| ||| ||||| | ||
Sbjct 546097 ACCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACG 546156
Query 156461 CAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|||||||||| || || ||||| || || ||||| ||
Sbjct 546157 TAGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTA 546195
>seq1
Length=3180511
Score = 104 bits (114), Expect = 7e-17
Identities = 108/141 (77%), Gaps = 3/141 (2%)
Strand=Plus/Plus
Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871
||||||||| | | ||| ||||||||| | || ||||| |||||| | || |||||
Sbjct 856231 CAGAATTTCCTTGAGACGTGGAACACCAAGAGTAACGTT---CTTGGATGAAATACCAGT 856287
Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
||||||||| || |||| || | ||| || | ||||||||||||| ||||| ||||
Sbjct 856288 AAAGTGGAAGGTGTTCAAGGTCATTTGTGTGGCTGGCTCACCAATAGACTGTGCAGCAAG 856347
Query 301932 CATACCAACCATTTCTCCTGG 301952
|| ||||||||| || || ||
Sbjct 856348 CACACCAACCATCTCACCAGG 856368
Score = 96.9 bits (106), Expect = 1e-14
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643
|||| | |||||| ||||| || |||||| | || || || || |||||||| | |
Sbjct 857027 TTGACGAGACGACGTTGAATGTATCCAGTTTCTGCAGTCTTAACTGCGGTATCAATCAAA 857086
Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAG 302703
|| |||||||| |||| || |||||||| | |||| || || || | | ||
Sbjct 857087 CCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCTGTGGGGGTGAGACCTCTGAGGTAG 857146
Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763
||| ||||||||||||| | || || ||||||| || |||||| || ||||| ||
Sbjct 857147 GAGTTCTCAACGAAACCTCTCGATTCTGGCGAATAATCATCCTTGGTGAAATGTGGAAGA 857206
Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804
|| | || || | || | || ||||| || || |||||
Sbjct 857207 GTGCGGTACTTGAAACCAAAAGGAATACGTTTACCTTCAAC 857247
>seq16
Length=836746
Score = 98.7 bits (108), Expect = 3e-15
Identities = 383/594 (64%), Gaps = 26/594 (4%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| || ||||| ||| ||| | ||| || ||| ||||||| || | ||| | | |
Sbjct 587879 ATGAGTCCACAAATATCACAGATATGAACTCTGAAAGCATCCGAAACCTCAAACAATCTC 587938
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
| || ||| | ||||||||| || |||||||||||||| ||||| || ||||||
Sbjct 587939 TCTTTCAAGAAAGCACTTGCACCGTGAGAGATCATACAATCACGTTCCATCTCTCCGAAA 587998
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586
|||||||||||||| | ||| | ||| ||| |||| || | || | | | | ||
Sbjct 587999 CGAAGACCACCATCTCTAGCACGACCTTCGACAGGTTGTCTGGTTAAAATTTGTACTGGG 588058
Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646
|| | | ||| ||| |||||| | |||||||| | ||| ||||| ||| |
Sbjct 588059 CCTCTTGCACGGGCATGAATCTTATCGTCGACCATATGGCGCAAACGTTGGTAATATGTG 588118
Query 251647 GGACCGATGAAGA--TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTT 251704
|| || | ||||| || | | ||| | ||||| || | | ||||||| |
Sbjct 588119 GGGCCAAGGAAGACTTGGGCCA--TCATCTTACGGCCAGTATGACCATGGTACATAATCT 588176
Query 251705 CGTTTCCATTAGATTCATAACCAAGTTTCTGTAGCTCTGAAGCAATAT---CAC-CAATC 251760
|| ||| ||| | || ||| || || | |||| ||| | || ||||
Sbjct 588177 CGAAACCACGAGAGTGGTAGCCATGT-------GCAC-GAAGTAATTTTGAGACTGAATC 588228
Query 251761 ----TTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTT 251816
||| || | || ||| | || || | || || || | | || ||
Sbjct 588229 GACGGTGACTTCCGTGAATGGGGTAGCATCACCCTCGAGTCCACGAAGAGTAGAAACCTT 588288
Query 251817 GCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATT 251876
| || | ||| ||| || || || ||||||||| ||||| || ||||||||
Sbjct 588289 ACTCAATTGACACTCAATCAAATGTGCAATTGTCATACGAGATGGAATGGCGTGGGGATT 588348
Query 251877 GATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-A 251935
||||||| ||||| | || || |||||| ||||| |||| || | ||| |
Sbjct 588349 AATGATGAGATCGGGAACAACACCCTCTCTAGTGAAAGGCATGTCCTGTTGC---ATATA 588405
Query 251936 TGT--TTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||| | ||||| |||||||| ||||||||||| ||| ||||| ||||||||
Sbjct 588406 TGTAATACCAATGGTTCCCTTCTGTCCGTGACGCGAAGCAAACTTGTCACCAAT 588459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471801646417102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |