Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq29 165 2e-35 seq1 104 7e-17 seq16 98.7 3e-15 >seq29 Length=608615 Score = 165 bits (182), Expect = 2e-35 Identities = 568/879 (65%), Gaps = 15/879 (2%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || || ||||| ||||| ||| || || || || |||| ||||| ||||| Sbjct 545323 GTACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTT 545382 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | || |||| || ||||| ||||| || ||| | || |||||||||| | || || Sbjct 545383 ACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGC 545442 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809 || ||||| ||| || | | || ||||| |||| |||| || Sbjct 545443 CTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGTCTTGCGACCCTTGCCAGCCTT 545502 Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || | ||||| | ||| | | ||||| || ||| || || || || Sbjct 545503 CTCGTAACTCTCATAGAGAGCCTCAA--ACTCCTCGCCATAAACGTCTGCCAAACCCGGA 545560 Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATA 155925 || | || |||||| | || | ||| | || | || ||||||| ||| || | Sbjct 545561 CATTCATTGGGGCACATAAGGGTCCAGTCTCCGTT--CTTTTCAACACGCTTCATGAAGA 545618 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985 |||| ||| | |||||||| || || | ||| || || | || |||| Sbjct 545619 GATCAGGAATCCACAAGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGAT 545678 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| ||||| || | ||| || || ||| | ||| |||||| || || | ||||| Sbjct 545679 TCTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAA 545738 Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 || |||| | |||| ||||| || || ||||| | || || || ||||| || | Sbjct 545739 AAGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTC 545798 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 ||||| |||| ||| || |||||| | || ||||| ||| |||| | ||||| | Sbjct 545799 GGAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAG 545858 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT--TTAGAAATTTGAGCGCA 156220 || | | ||||| | || ||||||||||| | ||| || || || || || Sbjct 545859 CACGGATTCTGTGAATGTTGAGACCAATACCACCGG--CATTCTTTGAGATCATGGCACA 545916 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280 ||| | ||| | | ||||||| || ||| ||| |||| ||| | || |||| Sbjct 545917 AATCTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCA 545976 Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 |||| | ||| | |||| || || || ||| ||||| || | ||||| |||| Sbjct 545977 CGAAGAAAGTTGTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAA 546036 Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAAT 156400 ||||| || ||||| ||| ||||||||| | |||||| || | |||||||| Sbjct 546037 GTACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCGTGAAT 546096 Query 156401 ACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCG 156460 || | | || | ||| ||| || || ||||| ||| ||| ||||| | || Sbjct 546097 ACCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACG 546156 Query 156461 CAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 |||||||||| || || ||||| || || ||||| || Sbjct 546157 TAGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTA 546195 >seq1 Length=3180511 Score = 104 bits (114), Expect = 7e-17 Identities = 108/141 (77%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 ||||||||| | | ||| ||||||||| | || ||||| |||||| | || ||||| Sbjct 856231 CAGAATTTCCTTGAGACGTGGAACACCAAGAGTAACGTT---CTTGGATGAAATACCAGT 856287 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 ||||||||| || |||| || | ||| || | ||||||||||||| ||||| |||| Sbjct 856288 AAAGTGGAAGGTGTTCAAGGTCATTTGTGTGGCTGGCTCACCAATAGACTGTGCAGCAAG 856347 Query 301932 CATACCAACCATTTCTCCTGG 301952 || ||||||||| || || || Sbjct 856348 CACACCAACCATCTCACCAGG 856368 Score = 96.9 bits (106), Expect = 1e-14 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643 |||| | |||||| ||||| || |||||| | || || || || |||||||| | | Sbjct 857027 TTGACGAGACGACGTTGAATGTATCCAGTTTCTGCAGTCTTAACTGCGGTATCAATCAAA 857086 Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAG 302703 || |||||||| |||| || |||||||| | |||| || || || | | || Sbjct 857087 CCTTCACGACCAGCCATGGCGTGGAAGAAGAACTCTGTGGGGGTGAGACCTCTGAGGTAG 857146 Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763 ||| ||||||||||||| | || || ||||||| || |||||| || ||||| || Sbjct 857147 GAGTTCTCAACGAAACCTCTCGATTCTGGCGAATAATCATCCTTGGTGAAATGTGGAAGA 857206 Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804 || | || || | || | || ||||| || || ||||| Sbjct 857207 GTGCGGTACTTGAAACCAAAAGGAATACGTTTACCTTCAAC 857247 >seq16 Length=836746 Score = 98.7 bits (108), Expect = 3e-15 Identities = 383/594 (64%), Gaps = 26/594 (4%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| ||| ||| | ||| || ||| ||||||| || | ||| | | | Sbjct 587879 ATGAGTCCACAAATATCACAGATATGAACTCTGAAAGCATCCGAAACCTCAAACAATCTC 587938 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 | || ||| | ||||||||| || |||||||||||||| ||||| || |||||| Sbjct 587939 TCTTTCAAGAAAGCACTTGCACCGTGAGAGATCATACAATCACGTTCCATCTCTCCGAAA 587998 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGA 251586 |||||||||||||| | ||| | ||| ||| |||| || | || | | | | || Sbjct 587999 CGAAGACCACCATCTCTAGCACGACCTTCGACAGGTTGTCTGGTTAAAATTTGTACTGGG 588058 Query 251587 CCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCG 251646 || | | ||| ||| |||||| | |||||||| | ||| ||||| ||| | Sbjct 588059 CCTCTTGCACGGGCATGAATCTTATCGTCGACCATATGGCGCAAACGTTGGTAATATGTG 588118 Query 251647 GGACCGATGAAGA--TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTT 251704 || || | ||||| || | | ||| | ||||| || | | ||||||| | Sbjct 588119 GGGCCAAGGAAGACTTGGGCCA--TCATCTTACGGCCAGTATGACCATGGTACATAATCT 588176 Query 251705 CGTTTCCATTAGATTCATAACCAAGTTTCTGTAGCTCTGAAGCAATAT---CAC-CAATC 251760 || ||| ||| | || ||| || || | |||| ||| | || |||| Sbjct 588177 CGAAACCACGAGAGTGGTAGCCATGT-------GCAC-GAAGTAATTTTGAGACTGAATC 588228 Query 251761 ----TTGAATTTGCTAAAACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTT 251816 ||| || | || ||| | || || | || || || | | || || Sbjct 588229 GACGGTGACTTCCGTGAATGGGGTAGCATCACCCTCGAGTCCACGAAGAGTAGAAACCTT 588288 Query 251817 GCCTAAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATT 251876 | || | ||| ||| || || || ||||||||| ||||| || |||||||| Sbjct 588289 ACTCAATTGACACTCAATCAAATGTGCAATTGTCATACGAGATGGAATGGCGTGGGGATT 588348 Query 251877 GATGATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-A 251935 ||||||| ||||| | || || |||||| ||||| |||| || | ||| | Sbjct 588349 AATGATGAGATCGGGAACAACACCCTCTCTAGTGAAAGGCATGTCCTGTTGC---ATATA 588405 Query 251936 TGT--TTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||| | ||||| |||||||| ||||||||||| ||| ||||| |||||||| Sbjct 588406 TGTAATACCAATGGTTCCCTTCTGTCCGTGACGCGAAGCAAACTTGTCACCAAT 588459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471801646417102