Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-18 seq23 91.5 2e-12 >seq3 Length=1645291 Score = 111 bits (122), Expect = 2e-18 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||| || ||||||||| |||| || ||| |||| |||||| | || ||||| Sbjct 736114 GCTGCCAACTATCTTGACATCAAGGCTCTTCTTGATGTTGGATGCAAGACCGTCGCCAAT 736055 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||| ||||| ||||| || ||||||||||| || ||||| ||||||| Sbjct 736054 ATGATTAAGGGAAAGTCTCCAGAGGAGATCCGAAAAACCTTCAACATCA 736006 >seq23 Length=743066 Score = 91.5 bits (100), Expect = 2e-12 Identities = 167/243 (69%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||||| || | | |||||| |||||||||||||| | | ||||| Sbjct 463098 GCCTTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATA 463157 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808 |||||| | ||| ||||||| | ||||| || ||| || |||||| Sbjct 463158 TTCTCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCAGAGCGA-- 463215 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 ||| || || || || || ||||||||||| || |||||| || |||||| || | Sbjct 463216 GGAGGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCA 463275 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 ||| || || || | |||| ||| ||| |||| |||||| || || || ||| || Sbjct 463276 AGAGAGCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGA 463335 Query 868929 TGA 868931 ||| Sbjct 463336 TGA 463338 Score = 86.0 bits (94), Expect = 8e-11 Identities = 138/195 (71%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 |||||||| || ||| | ||||||| || | ||| || | |||||| || |||||| Sbjct 463413 CCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCCATGAGACCACGCTTC 463472 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || ||||| ||||||| | ||| || ||||| || || || || |||||||| || Sbjct 463473 TTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCTTCAACGGCGGCGAAA 463532 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT--TGA-TCCACTTCATCGCC 869356 ||| ||| || | ||||| || || | ||||| ||| |||| || | ||| Sbjct 463533 GCGACGAGACGTTGAGCAAAAGTA--GAA----TTCTTGTCTTGAATCCATTTGACAGCC 463586 Query 869357 CAGTCGGCCTTTTTC 869371 ||||||||||| ||| Sbjct 463587 CAGTCGGCCTTCTTC 463601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107069773278182