Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq11 138 1e-27 seq27 109 5e-19 >seq11 Length=1281110 Score = 138 bits (152), Expect = 1e-27 Identities = 163/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 24714 TTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAG 24773 || |||| || || ||||| || || || |||||||| || ||| | | ||||| | | Sbjct 151066 TTGTTAAGACACTCACCGGAAAGACCATCACGCTCGAGGTTGAATCTTCTGACACTATCG 151125 Query 24774 A-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTG 24832 | |||| ||| | || ||| |||||||| || ||||| || |||||||||||||||||| Sbjct 151126 ATAACGTTAAGTCGAA-GATTCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTG 151184 Query 24833 ATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAG 24892 ||||| ||||| || || || |||||| | | | | || ||||| || ||||| ||| Sbjct 151185 ATCTTCGCCGGAAAGCAACTTGAGGATGGTCGCACCCTCTCCGATTACAATATTCAGAAG 151244 Query 24893 GAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || |||||||| | || | ||||| || Sbjct 151245 GAATCTACCCTCCACTTGGTCCTTAGACTTCGCGGTGG 151282 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || ||||||| || || || || | || || || | | Sbjct 151284 ATGCAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCG 151343 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | ||||| ||||| |||||||| || ||||| || ||||| ||| Sbjct 151344 GATACCATCGATAATGTAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCAA 151403 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || ||||| || || ||| | | | | || ||||| ||| Sbjct 151404 CAACGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCGGATTACAAC 151463 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || ||||||||||| || |||| ||||| Sbjct 151464 ATCCAAAAGGAATCTACTTTACATTTGGT 151492 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| |||| || | || || || || ||||| | ||||| ||| | | Sbjct 151512 ATGCAAATCTTTGTTAAGACTTTGACTGGGAAGACAATTACATTAGAAGTTGAATCGTCA 151571 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||| || || || || || || || || || ||| Sbjct 151572 GATACTATTGATAATGTCAAGTCAAAGATTCAGGATAAGGAGGGTATCCCCCCTGACCAA 151631 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || || ||| |||||||| |||| | || || || ||| Sbjct 151632 CAGAGATTGATCTTTGCAGGAAAGCAGTTGGAGGATGGTAGAACACTTTCCGACTACAAC 151691 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||||||||||| || | ||||||||| Sbjct 151692 ATTCAAAAGGAAAGCACCTTGCACTTGGTG 151721 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 24726 TAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAAC 24785 |||| || || || || || || || || || | | ||| ||| | || | || || Sbjct 150795 TAACTGGCAAGACCATCACCCTTGAGGTCGAGTCGAGCGATACAATTGATAATGTTAAGT 150854 Query 24786 AAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGA 24845 |||||||| ||||| || ||||| || ||||| ||||| |||||||| || ||||| | Sbjct 150855 CTAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAA 150914 Query 24846 AACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTAC 24905 |||| || |||||| | | | || || || |||||||||||||| || || || | Sbjct 150915 AACAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCCACTCTCC 150974 Query 24906 A 24906 | Sbjct 150975 A 150975 >seq27 Length=671268 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || ||||| || || ||||| || || | | Sbjct 264027 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 263968 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || ||||| || ||||| ||| Sbjct 263967 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAA 263908 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||| || || || || || |||||| | | | || || || ||| Sbjct 263907 CAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAAC 263848 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || ||||| || || || || ||||||||||| || Sbjct 263847 ATCCAAAAAGAGTCCACCCTTCACTTGGTGTTACG 263813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892842332880