Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-14 seq23 96.9 5e-14 seq29 87.8 3e-11 >seq3 Length=1645291 Score = 98.7 bits (108), Expect = 2e-14 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || |||||||| || ||||||||| | || || ||| | || ||||||||||| ||||| Sbjct 736114 GCTGCCAACTATCTTGACATCAAGGCTCTTCTTGATGTTGGATGCAAGACCGTCGCCAAT 736055 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 | || ||||| ||||| || ||||| ||||| || ||||| ||||||| Sbjct 736054 ATGATTAAGGGAAAGTCTCCAGAGGAGATCCGAAAAACCTTCAACATCA 736006 >seq23 Length=743066 Score = 96.9 bits (106), Expect = 5e-14 Identities = 174/251 (69%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || ||||| || | | |||||| |||||||||||||| | | Sbjct 463090 TGACACCAGCCTTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 463149 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG-CACCC- 794008 ||||| |||||| | ||| |||||||| | |||| || ||| |||| Sbjct 463150 AGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCA 463209 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 |||||| | || || || || || ||||| || ||||| || |||||| | || ||| Sbjct 463210 GAGCGAGG--AGGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTT 463267 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 ||| || | ||| || || || | |||| | | ||| |||| |||||| || || || Sbjct 463268 CATTCCCAAGAGAGCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGC 463327 Query 794129 CTCGATGATGA 794139 ||| |||||| Sbjct 463328 TTCGGTGATGA 463338 >seq29 Length=608615 Score = 87.8 bits (96), Expect = 3e-11 Identities = 176/259 (68%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| ||||| | || |||| ||| || || ||||||||||| |||| ||||||||| Sbjct 545765 TGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATGGGAACAATGCCGTTGGAA 545824 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | |||||||| || || | ||||| || | || || | |||| | | || Sbjct 545825 TTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCACGGATTCTGTGAATGTTGAGACCA 545884 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || || ||||| ||| ||||| | || || | |||| || ||||| || || ||| Sbjct 545885 ATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTGTCGTAAATACCATCG 545944 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACG--AGTTTTGCGGGCGCGCCGTGC 2073778 || || | |||||||| | || |||||||| | |||| ||| | | | || | Sbjct 545945 ATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAGAAAGTTGTGCCTGTGGG--GTAC 546002 Query 2073779 CGGCATTGAAGAGCGTGGG 2073797 | ||| |||||| || || Sbjct 546003 CCGCAGAGAAGAGTGTTGG 546021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916156407121394