Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3 98.7 2e-14
seq23 96.9 5e-14
seq29 87.8 3e-11
>seq3
Length=1645291
Score = 98.7 bits (108), Expect = 2e-14
Identities = 87/109 (80%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| |||||||| || ||||||||| | || || ||| | || ||||||||||| |||||
Sbjct 736114 GCTGCCAACTATCTTGACATCAAGGCTCTTCTTGATGTTGGATGCAAGACCGTCGCCAAT 736055
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
| || ||||| ||||| || ||||| ||||| || ||||| |||||||
Sbjct 736054 ATGATTAAGGGAAAGTCTCCAGAGGAGATCCGAAAAACCTTCAACATCA 736006
>seq23
Length=743066
Score = 96.9 bits (106), Expect = 5e-14
Identities = 174/251 (69%), Gaps = 4/251 (2%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || ||||| || | | |||||| |||||||||||||| | |
Sbjct 463090 TGACACCAGCCTTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 463149
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG-CACCC- 794008
||||| |||||| | ||| |||||||| | |||| || ||| ||||
Sbjct 463150 AGGAGATATTCTCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCA 463209
Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
|||||| | || || || || || ||||| || ||||| || |||||| | || |||
Sbjct 463210 GAGCGAGG--AGGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTT 463267
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
||| || | ||| || || || | |||| | | ||| |||| |||||| || || ||
Sbjct 463268 CATTCCCAAGAGAGCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGC 463327
Query 794129 CTCGATGATGA 794139
||| ||||||
Sbjct 463328 TTCGGTGATGA 463338
>seq29
Length=608615
Score = 87.8 bits (96), Expect = 3e-11
Identities = 176/259 (68%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
||||| ||||| | || |||| ||| || || ||||||||||| |||| |||||||||
Sbjct 545765 TGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATGGGAACAATGCCGTTGGAA 545824
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
| |||||||| || || | ||||| || | || || | |||| | | ||
Sbjct 545825 TTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCACGGATTCTGTGAATGTTGAGACCA 545884
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| || ||||| ||| ||||| | || || | |||| || ||||| || || |||
Sbjct 545885 ATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTGTCGTAAATACCATCG 545944
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACG--AGTTTTGCGGGCGCGCCGTGC 2073778
|| || | |||||||| | || |||||||| | |||| ||| | | | || |
Sbjct 545945 ATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAGAAAGTTGTGCCTGTGGG--GTAC 546002
Query 2073779 CGGCATTGAAGAGCGTGGG 2073797
| ||| |||||| || ||
Sbjct 546003 CCGCAGAGAAGAGTGTTGG 546021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916156407121394
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |