Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq27 116 2e-21 seq11 105 4e-18 seq54 104 2e-17 >seq27 Length=671268 Score = 116 bits (128), Expect = 2e-21 Identities = 156/215 (73%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| |||| ||| || || ||||| ||||| || || | || |||| || Sbjct 263819 ACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCA 263878 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 ||||||||||| |||||||||| ||| || ||||| | || | ||||||||||| | Sbjct 263879 AGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGG 263938 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944 || || ||||| || | ||||| || | ||| || || | ||| ||||| Sbjct 263939 ATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGT 263994 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 || ||||| |||||||| || ||||||||||||| Sbjct 263995 TTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGA 264029 >seq11 Length=1281110 Score = 105 bits (116), Expect = 4e-18 Identities = 150/209 (72%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || ||||||| ||| | ||| ||||||||||| || || || || ||| |||| || Sbjct 151270 CTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCA 151211 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || |||||||||||||||||||||| ||||| || || | || | ||||||||| Sbjct 151210 TCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTG 151151 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938 || || | | || | | | | | ||||||| ||| | || || || | || Sbjct 151150 TC-TTGAATCTTCGACTTA---ACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGT 151095 Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 ||||||||||| ||||| ||||| |||| Sbjct 151094 GATGGTCTTTCCGGTGAGTGTCTTAACAA 151066 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| || ||||| ||| |||| |||| || ||||| || || |||||| Sbjct 151474 TCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAG 151415 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| ||||| | || | ||||||||||| | || || || || || Sbjct 151414 ATAAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGAATCTTAGACTTTAC--AT 151357 Query 34907 GCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 ||||||| || | ||| || || | || ||||||||||| || | ||||| Sbjct 151356 --TATCGATGGTATCCGACGACTCAACCTCCAAAGTGATGGTCTTTCCGGTTAAAGTCTT 151299 Query 34963 TACAAAGATCTGCAT 34977 || || |||||||| Sbjct 151298 GACGAAAATCTGCAT 151284 >seq54 Length=188590 Score = 104 bits (114), Expect = 2e-17 Identities = 136/186 (73%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| || ||||| ||||| || || | || | || || ||||||||||| ||||||| Sbjct 62441 CCTTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 62500 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||||| ||||| | || | ||||||||||| | || || ||||| || Sbjct 62501 TCAAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 62557 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| ||| || |||||| |||| ||| |||||||| ||||| |||||||| Sbjct 62558 -TGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTG 62616 Query 34964 ACAAAG 34969 || ||| Sbjct 62617 ACGAAG 62622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689441903674