Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq11 223 3e-52
seq1 134 1e-25
seq5 107 1e-17
seq52 102 6e-16
>seq11
Length=1281110
Score = 223 bits (246), Expect = 3e-52
Identities = 934/1451 (64%), Gaps = 25/1451 (2%)
Strand=Plus/Plus
Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500
|| || |||||||| | ||| |||||||| ||||||||||| || || | | ||||||
Sbjct 236717 ATTCCGTTGGCATCAAGATCGAATGTGACCTCAATTTGAGGAACACCACGTGGTGCAGGT 236776
Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560
||||| || | | ||| | |||| | || || || || ||| || || |||
Sbjct 236777 GGGATACCAGTGAGCTCGAATTTACCCAAAAGGTTGTTGTCCTTGGTGCGTTGACGCTCA 236836
Query 281561 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 281620
|||||||| | |||||| || ||| ||| || || || | || | || || |
Sbjct 236837 CCCTCGAAGACTTGGATGAGGACACCAGGTTGGTTGTCAGAGAAGGTGGAGAAGACCTCG 236896
Query 281621 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCT 281680
|| || || || || || |||||||| || | |||||||| ||||||||
Sbjct 236897 GACTTCTTGGTGGGGATGGTGGTGTTTCTTGGGATGAGCTTGGTCATCTGTCCACCAGCA 236956
Query 281681 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTT 281738
|| || | ||| ||||| | || | |||||| | |||| || | || | | ||
Sbjct 236957 GTCTCGATACCGAGAGACAATGGGGCGACATCGAGAAGGAGGATCTCGTTGGTGGACTTG 237016
Query 281739 CATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 281797
| | || | |||| ||| ||||| || || | |||||||| ||||||||||| |||
Sbjct 237017 GAGGAAGTGTCACCAGAAAGGATAGCAGCCTGGACGGCAGCACCGTATGCAACAGCCTCA 237076
Query 281798 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT- 281856
|| || || | | | ||| | | ||||| ||||| | | | | || | |||
Sbjct 237077 TCGGGGTTGATGGACTTGTTTGGCTCCTTACCGTTGAAGTAGTCGGTGATGAGCT-TCTG 237135
Query 281857 --TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC-CTGTGATTT 281913
||| | || ||||||| || || ||||| | || || || || || ||| |||||
Sbjct 237136 GATACGT--GGGATACGAGTGGAACCACCAACGAGGACGATCTCGTGGACTCTG-GATTT 237192
Query 281914 ATCCAGTTTTGAATC--CAATAAAACTTTTTCAAC-GGGTTCAAGACCAGCTCTAAACAA 281970
|| | || | ||| ||| | || | | || ||| | | || | || |
Sbjct 237193 GTCAATCTTGGCATCGGCAAGGACACGGT--CGACTGGGGTGGTGGT-AGAACGGAAGAG 237249
Query 281971 GTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTC 282030
||| |||||||| ||||| ||| | || | | | | |||| || || ||
Sbjct 237250 GTCCTGGCAAAGTTCCTCGAAACGAGCACGGGTGATGGAGGTGTAGAAATCGATACCCTC 237309
Query 282031 GAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACG 282090
||| | ||| |||| ||||| | ||||||| || || || || | ||| ||||||||
Sbjct 237310 GAAGAGAGAGTCAATCTCAATAGAGGTTTGAGCAGATGAGGAGAGGGTACGCTTAGCACG 237369
Query 282091 TTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT-TCAAATCTGTTTTAT 282149
|| || || || | || | || | || || | | || |||||||| | || |
Sbjct 237370 CTCGCAAGCAGTGCGGAGACGACGGAGAGCACGAGC-GTTGGAGCTCAAATCTTTCTTGT 237428
Query 282150 ATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTC 282209
|||| |||||| || || | | || ||||| || ||||| || ||||| |
Sbjct 237429 GCTTTCGCTTGAATTCGCTTACGAAGTGGTTGACGAGACGGTTGTCAAAGTCCTCACCAC 237488
Query 282210 CCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAA 282269
|||| | ||| | || | || | | || | ||| | || || || | | ||| |
Sbjct 237489 CCAAGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCCTCCTCGATGGTCAAGA 237548
Query 282270 GAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTT 282329
||| |||||| |||||| ||||| | ||| || || || || || || ||
Sbjct 237549 GAGAGACATCAAAGGTTCCTCCACCAAGATCGAAGATGAGAACGTTACGCTCACCCTCAA 237608
Query 282330 GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389
|| || || | ||| || |||| |||||| || || ||||| || || || | | |
Sbjct 237609 TCTTCTTGTCCAAACCGTAAGCAATAGCAGCTGCGGTAGGTTCGTTGATGATACGGAGGA 237668
Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449
| |||||||||||||| || || || || || ||||| | |||||||||| | || |
Sbjct 237669 CGTTAAGACCAGCAATGAGACCAGCGTCCTTGGTAGCTTGACGTTGTGAATCGGTGAAGT 237728
Query 282450 ATGCAGGAACAGTAATAACGGCATCTGTT-ACTTCTTTTCCAATATAAGCGCTTGCTGTT 282508
| || || || || | ||||| | |||| || | |||| ||||| || ||
Sbjct 237729 AAGCTGGGACTGTGACGACGGCGT-TGTTGACAGTTCCACCAAGGTAAGCCTCAGCAGTC 237787
Query 282509 TGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTC- 282567
| | |||| || || ||||| || || |||| |||||| | |||||||| ||
Sbjct 237788 TCTCTCATCTTGACCAAGATCATGGAAGAGATTTCTTCTGGTGTGAATTGCTTGTTCTCG 237847
Query 282568 ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCA 282627
|||| | || |||| ||| || || | || || || ||||| |
Sbjct 237848 CCCTTGA-ACTCGACCTCAATGACTGGCTTTCCGGCACGGTCAACGACCTTGAATGGGAA 237906
Query 282628 ATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCTCTACCAATTAATCGTTTTG 282686
| |||||||| | |||||| || || || || | | |||||| || || || |
Sbjct 237907 GTGCTTCATATCGGCTTGAAC-CTCAGGATCTGCGAACTTGCGACCAATCAAACGCTTCG 237965
Query 282687 CATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCA 282746
|||| || | || ||| |||| || | || |||||| ||||| ||||| || ||||
Sbjct 237966 CATCGAAGACGGTGTTGATTGGGTTCATGGCGACTTGATTCTTGGCAGCATCACCGATCA 238025
Query 282747 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 282806
|| | || || ||||| || | ||| | ||||| || || || || ||||| || || |
Sbjct 238026 GACGCTCGGTATCTGTGAAAGCAACGAAGGATGGGGTGGTTCGGTTTCCTTGGTCGTTGG 238085
Query 282807 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 282866
| |||||||| | | || | | | | | ||| || || | || || || ||||
Sbjct 238086 CGATAATTTCGATTCTATCGTCACGGAAGATACCCACGCAGGAGTAGGTGGTACCCAAAT 238145
Query 282867 CAATACCAATA 282877
| |||||||||
Sbjct 238146 CGATACCAATA 238156
>seq1
Length=3180511
Score = 134 bits (148), Expect = 1e-25
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||| ||||||||| || | ||||||||||||||||| |||||||| | ||||| |||
Sbjct 858570 GGTAAGGAAGGTCGTCTTCGTGGAAATTTGATGGGAAAACGTGTCGACTTTTCTGCTCGT 858511
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| ||||||||| |||||| ||| || |||| |||| ||||||||||||| | |||
Sbjct 858510 ACCGTTATTACTGGTGATCCCAATCTTTCTCTAGATGAGGTTGGTGTTCCTCGAAGCATT 858451
Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGATTATTTGACTCAA 432467
|||| || || || | | || | || ||| || || || ||| | ||| |||
Sbjct 858450 GCGAGAATCCTCACCTATCCGGAGACCGTTACACCACTCAACATCGATAAGTTGCATCAG 858391
Query 432468 TTAGTGAAAAATGGTAAAAGA-GTATATCCAGGTGCCAATTTTGTAAT 432514
| || |||||||| | ||| | |||| |||||||| | ||| ||
Sbjct 858390 CTCGTTAAAAATGG-ACCAGATGAGCATCCCGGTGCCAAATATGTCAT 858344
Score = 95.1 bits (104), Expect = 9e-14
Identities = 206/306 (67%), Gaps = 8/306 (3%)
Strand=Plus/Plus
Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251
|||| ||||||| ||||||||| | || | || | ||||| | || ||| | |
Sbjct 1325865 TATCGAAATCTTGACCTCCCAAATGGGTGTCACCGGCAGTAGCCTTGACGGTGAAGACAC 1325924
Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311
|| ||| | | |||| |||||| ||||||||||| | ||| | || || |
Sbjct 1325925 CACCTTGGATGTTAAGGAGAGAAACATCGAAAGTTCCACCACCGAGATCGTAGATGAGAA 1325984
Query 282312 CATTCATTTCTTTGTCTTGGTTTTT-----ATCAAGACCATACGCAAAAGCAGCAGCAGT 282366
| || || ||| |||| ||| | ||||||| || |||| |||||||| ||
Sbjct 1325985 CGTTGCGCTCCTTG--TTGGACTTTCCAGCACCAAGACCGTAAGCAATGGCAGCAGCGGT 1326042
Query 282367 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426
||||| || || || | | || |||||||| ||||| || ||||| || || ||
Sbjct 1326043 AGGTTCGTTGATGATACGGAGGACGTTAAGACCGGCAATGGCACCAGCATCCTTGGTAGC 1326102
Query 282427 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA-CTTCTT 282485
||| | ||| ||||| || || || |||||||| |||||||| | || | ||||||
Sbjct 1326103 TTGACGTTGGTTGTCGTTGAAGTAAGCTGGAACAGTGATAACGGCCTTTGAGACCTTCTT 1326162
Query 282486 TTCCAA 282491
||||
Sbjct 1326163 GCCCAA 1326168
>seq5
Length=1611257
Score = 107 bits (118), Expect = 1e-17
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 131165 AAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTT 131224
|| ||| || ||||||| || || ||||||||||||||||| ||| | || | |||||||
Sbjct 53471 AATATACAAGTTGTAGTTGCAACGATAGCATTTGGTATGGGCATTGACAAGCAGGATGTT 53412
Query 131225 AGAGTTGTTATTCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGT 131284
|| |||| |||||||| | ||| |||| | | |||||||| ||||| |||| |||
Sbjct 53411 CGATTTGTCATTCATTATTGCCTTCCTAAGACTTTGGAAGGTTACTATCAGGAAACTGGA 53352
Query 131285 AGAGCAGGTCGTGATGG 131301
|||| || || |||||
Sbjct 53351 CGAGCGGGCCGAGATGG 53335
>seq52
Length=201257
Score = 102 bits (112), Expect = 6e-16
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394
|| || | ||| || || | ||||||||||||||| || || | || ||| | || ||
Sbjct 160129 TTCTCCAAACCGTAAGCGAGAGCAGCAGCAGTTGGCTCGTTCACAACTCTGAGGACGTTC 160188
Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454
| |||||||||| || ||||| ||||| ||||| | ||| |||||||| || |||||
Sbjct 160189 AAACCAGCAATTTGACCAGCATCCTTAGTAGCTTGACGTTGAGAATCGTTGAAGTATGCT 160248
Query 282455 GGAACAGTAATAACGGCAT 282473
||||| |||| |||||||
Sbjct 160249 GGAACGGTAACGACGGCAT 160267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740588864975196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |