Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq11 147 4e-30 >seq11 Length=1281110 Score = 147 bits (162), Expect = 4e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || || || | ||||||||| || || || || ||||| | Sbjct 151512 TACCACCACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCG 151453 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| |||||||| ||||| ||||| || | |||||| || || | Sbjct 151452 AAAGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTG 151393 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||| ||||||||||| | |||||||| || || ||||| | || | Sbjct 151392 GGATTCCCTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAA 151333 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || ||||| || || || ||||| || || |||||||| Sbjct 151332 CCTCCAAAGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284 Score = 127 bits (140), Expect = 4e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| || |||||||| ||||| ||||| ||||| || || | | ||| || Sbjct 151267 AGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCC 151208 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || ||||| ||||| || ||||| | | ||||||||| || || ||||| ||||| ||| Sbjct 151207 TCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCT 151148 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 |||||||| | || || || || || || ||| || ||| || || | || || ||| Sbjct 151147 TGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGCGTGATGGTC 151088 Query 82779 TTGCCTGTCAACGTCTTTACAAATA 82803 || || || | ||||| |||| || Sbjct 151087 TTTCCGGTGAGTGTCTTAACAACTA 151063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981816557606794