Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq29 183 7e-41 seq23 118 3e-21 >seq29 Length=608615 Score = 183 bits (202), Expect = 7e-41 Identities = 520/796 (65%), Gaps = 5/796 (1%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || || |||||||| |||||||| || | || | || ||| || ||||| | | Sbjct 546195 TACTTCGGTTTCAAGACTCTTGAGCGATCATACCTTCTACGTCTCGATGGCAAAGTTGCA 546136 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 |||||||| ||||| ||| | | ||||||||| |||||||||| || |||||||| | Sbjct 546135 GAACGTCCACAACAAATGATCATGCGTGTTGCGGTTGGTATTCACGGTGATGATATTGAG 546076 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 || ||||| || || || | || ||| | || ||||| | || || Sbjct 546075 AGTGCCATTGAGACATACAATTTAATGTCAAACAAGTACTTTACACATGCCTCCCCAACA 546016 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 || || || || || | |||| | |||| ||||| || | | || || Sbjct 546015 CTCTTCTCTGCGGGTACCCCACAGGCACAACTTTCTTCGTGCTTCCTCATCGACATGAAA 545956 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAA 110602 || ||| ||| || |||||||| || || || |||| ||| | || || || || Sbjct 545955 GAAGATAGTATCGATGGTATTTACGACACT-TTGAAGATTTGTGCCATGATCTCAAAGAA 545897 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662 | || || |||||| | || |||| || || | | || || ||||||| Sbjct 545896 TGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGCCTATATCGCCGG 545837 Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722 | || || ||| | || ||||||| ||| | |||| |||||| |||| || | Sbjct 545836 TACCAACGGAAATTCCAACGGCATTGTTCCCATGCTCCGAGTTTTCAACAACACCGCCAG 545777 Query 110723 ATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779 |||||| | ||||||||| ||| | ||| | |||||| | || || || || || Sbjct 545776 ATATGTTGACCAAGGTGGTAACAAGCGCCCTGGTGCTTTTGCTGTTTACCTTGAGCCATG 545717 Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839 |||| | ||| | || || ||| | || || || || ||||| || |||||| | Sbjct 545716 GCATGCCGATGTTTTCGAGTTCCTTGATCTACGCAAGAATCATGGTAAGGAAGAAGTTCG 545657 Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899 ||||||||| | || ||||| |||||||| | ||| | |||||||| |||||| || | Sbjct 545656 CGCACGTGATCTCTTCTATGCCTTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAAAA 545597 Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGG 110959 || || ||| | |||||||| || || | ||| ||| | | || || ||||| Sbjct 545596 GAACGGAGACTGGACCCTTATGTGCCCCAATGAATGTCCGGGTTTGGCAGACGTTTATGG 545537 Query 110960 AAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAAT 111019 | |||||||| | || || || | || || || | |||||| |||||| || Sbjct 545536 CGAGGAGTTTGAGGCTCTCTATGAGAGTTACGAGAAGGCTGGCAAGGGTCGCAAGACCAT 545477 Query 111020 TCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTA 111079 | |||||| | ||||||| | || || || | ||| || || |||| ||||| Sbjct 545476 TAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAGGCGCAAACCGAGACAGGAAATCCTTT 545417 Query 111080 TATTTTGTATAAAGAT 111095 || | || |||||| Sbjct 545416 CATGCTTTACAAAGAT 545401 >seq23 Length=743066 Score = 118 bits (130), Expect = 3e-21 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846 ||||| || || ||||| || || |||||| | |||||||||||||| | ||| Sbjct 463614 TTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGACAAGAATTCTA 463555 Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906 |||| || | | || || ||||| || ||||||||||| ||||| || || | | Sbjct 463554 CTTTTGCTCAACGTCTCGTCGCTTTCGCCGCCGTTGAAGGTATTTTCTTCTCCGGATCCT 463495 Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966 || | ||||| ||||||||||||||||| | ||| |||||||| | || ||||| Sbjct 463494 TCGCCTCCATCTTCTGGCTTAAGAAGCGTGGTCTCATGGCTGGACTCACTTTCTCCAACG 463435 Query 131967 AATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006 || ||||||| | || |||| | || ||||| ||||| Sbjct 463434 AACTCATCTCCCGTGACGAAGGCCTCCACACTGACTTTGC 463395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186799935691006