Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq11 102 2e-16 seq3 87.8 4e-12 >seq11 Length=1281110 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| ||||| || ||||| | || || ||| ||||||||| |||| Sbjct 151071 AAGACACTCACCGGAAAGACCATCACGCTCGAGGTTGAATCTTCTGACACTATCGATAAC 151130 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| || || |||||| || || ||| | | |||||| Sbjct 151131 GTTAAGTCGAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTGATCTTC 151190 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| | || ||||| | || | |||||||||| | ||||| || ||| Sbjct 151191 GCCGGAAAGCAACTTGAGGATGGTCGCACCCTCTCCGATTACAATATTCAGAAGGAATCT 151250 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||| | || | |||||||| Sbjct 151251 ACCCTCCACTTGGTCCTTAGACTTCG 151276 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || ||||| || ||||||||||| || || || || Sbjct 151287 CAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCGGAT 151346 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||||||||| || || ||||| || ||| ||| Sbjct 151347 ACCATCGATAATGTAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCAACAA 151406 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || || || | |||||||| | || | | ||||||||| || Sbjct 151407 CGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCGGATTACAACATC 151466 Query 206353 CAGAAAGAGTCTACT 206367 || || || |||||| Sbjct 151467 CAAAAGGAATCTACT 151481 >seq3 Length=1645291 Score = 87.8 bits (96), Expect = 4e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 101536 TTCAGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGAAACGAAG 101595 ||| || ||||| |||| ||| ||||| | |||||||| | | | | |||||||||| Sbjct 549031 TTCGGCAACCTTTCGGACGTAGTTGTGACGCTTCTCCTCACGAAGACGCGCGAAACGAAG 548972 Query 101596 GGCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGACGTCAAAATTATGAAGAAT 101655 |||||||| || || | ||||| |||||||||||| |||| ||| || || | ||| Sbjct 548971 AGCAGATTGACCACCACGACCGTGCTTCTTTGGCAAATCGACGGAAAACTTGTGGACAAT 548912 Query 101656 TTTCTTGGTGTTCCCA 101671 | ||||||| ||| Sbjct 548911 ATCTCTGGTGTTTCCA 548896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181807989801166