Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq11 102 2e-16
seq3 87.8 4e-12
>seq11
Length=1281110
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| ||||| || ||||| | || || ||| ||||||||| ||||
Sbjct 151071 AAGACACTCACCGGAAAGACCATCACGCTCGAGGTTGAATCTTCTGACACTATCGATAAC 151130
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||||||||| || || |||||| || || ||| | | ||||||
Sbjct 151131 GTTAAGTCGAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTGATCTTC 151190
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||||||||| | || ||||| | || | |||||||||| | ||||| || |||
Sbjct 151191 GCCGGAAAGCAACTTGAGGATGGTCGCACCCTCTCCGATTACAATATTCAGAAGGAATCT 151250
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| || ||| | || | ||||||||
Sbjct 151251 ACCCTCCACTTGGTCCTTAGACTTCG 151276
Score = 86.0 bits (94), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || ||||| || ||||||||||| || || || ||
Sbjct 151287 CAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCGGAT 151346
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| |||||| ||||||||||| || || ||||| || ||| |||
Sbjct 151347 ACCATCGATAATGTAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCAACAA 151406
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| ||||||||||| || || || | |||||||| | || | | ||||||||| ||
Sbjct 151407 CGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCGGATTACAACATC 151466
Query 206353 CAGAAAGAGTCTACT 206367
|| || || ||||||
Sbjct 151467 CAAAAGGAATCTACT 151481
>seq3
Length=1645291
Score = 87.8 bits (96), Expect = 4e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 101536 TTCAGCCACCTTCCGGAGGTAATTGTGCCTCTTCTCCTTTCTTAATCTCTCGAAACGAAG 101595
||| || ||||| |||| ||| ||||| | |||||||| | | | | ||||||||||
Sbjct 549031 TTCGGCAACCTTTCGGACGTAGTTGTGACGCTTCTCCTCACGAAGACGCGCGAAACGAAG 548972
Query 101596 GGCAGATTGTCCTCCCCTCCCGTGTTTCTTTGGCAAAGAGACGTCAAAATTATGAAGAAT 101655
|||||||| || || | ||||| |||||||||||| |||| ||| || || | |||
Sbjct 548971 AGCAGATTGACCACCACGACCGTGCTTCTTTGGCAAATCGACGGAAAACTTGTGGACAAT 548912
Query 101656 TTTCTTGGTGTTCCCA 101671
| ||||||| |||
Sbjct 548911 ATCTCTGGTGTTTCCA 548896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181807989801166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |