Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq11 109 5e-19 >seq11 Length=1281110 Score = 109 bits (120), Expect = 5e-19 Identities = 166/235 (71%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 35503 TTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGT 35561 |||||| |||||||| | | | |||||| || || || || |||||||||||||||| Sbjct 151746 TTTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGT 151687 Query 35562 AATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGT 35621 | |||| | |||| | || |||| |||||| || ||||| ||||| | ||| |||| Sbjct 151686 AGTCGGAAAGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGT 151627 Query 35622 CCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCG 35681 | | || | | |||||| ||| |||||| ||| | | | | | || || || Sbjct 151626 CAGGGGGGATACCCTCCTTATCCTGAATCTTTGACTTGACATTATCAATAGTATCTGACG 151567 Query 35682 ATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || | || || || || || |||||||| || ||||| || ||||| Sbjct 151566 ATTCAACTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||||||||| ||| |||||||| ||||||||||| | Sbjct 151510 CCACCACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAA 151451 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || || || ||||| || || || | || || ||||| | || Sbjct 151450 AGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGG 151391 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| ||||| ||| | | | | | || || ||| || ||| Sbjct 151390 ATTCCCTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACC 151331 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| || || || || ||||| || || || |||||||| Sbjct 151330 TCCAAAGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||||||||| || |||||| || | || || || || || || || || Sbjct 150964 CTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCCTCAAGTTGTTTTCCGGCGAA 150905 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||| ||||| | || | | |||||||||| |||||| ||| | | | Sbjct 150904 AATCAAACGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTAGACTTAACATT 150845 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | || |||||||| || ||||| | ||||| || || || || Sbjct 150844 ATCAATTGTATCGCTCGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 150797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450788832857680