Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq29 304 2e-77 seq23 114 2e-20 >seq29 Length=608615 Score = 304 bits (336), Expect = 2e-77 Identities = 1326/2070 (64%), Gaps = 57/2070 (3%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 ||||| ||||| |||| || || | | ||||| | ||||||||| ||||| |||| | Sbjct 544373 GTAAATTGAATAGGTGCCGAGGCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAA 544432 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || | |||| || ||||||||| ||| | ||| | ||||| || Sbjct 544433 CCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCTTTCATG 544492 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 ||||| ||||| |||||| |||||| |||||||| || | ||| || ||||||| | | Sbjct 544493 TGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAACA 544552 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 || | || | |||||||||| |||||| ||| ||||| ||| |||||| | Sbjct 544553 ATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 544612 Query 68614 CTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | | ||||||| |||||||||||||| | || || ||||| || | |||| | Sbjct 544613 TTGGGGATATTTTGGATGGATCCACCATCAGCAATGATACGGTTCTTCATATTATCAGAC 544672 Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730 || | | || | | || | || || || || || | || ||||| ||| Sbjct 544673 CAGAGACCCATATCGACGAGATCTTTGAGAAGCCATGGGTTGACGACCTGGAATTCTCCA 544732 Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790 | | || | ||| | ||| || || ||||| ||||| | | |||| || || Sbjct 544733 GCAAGAACACGACGCGAGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTGAAACCA 544792 Query 68791 AGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCA 68850 || ||||| | || |||||||||||||| || || | | | || | | || Sbjct 544793 AGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGGATTCCG 544852 Query 68851 TGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTC 68910 ||| |||| | || | | ||||||||| | ||||| ||| |||| | Sbjct 544853 TGTTGCTTGATCGATTGCTTCAACGAGTCCCAATCCCACAAATCAGTAGGTGTAACACCC 544912 Query 68911 CAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGT 68970 || | |||||||| || || ||| | || || | ||| ||||| || || Sbjct 544913 CACATGTCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAAGTTTCGTATGGA 544972 Query 68971 CC---TTCCTGTTCAGCTAGTTCACAACT--TGCCTCTAATGCACCGTAATAAATTGTTT 69025 || ||||| | | | || |||| || || ||| ||| || || || | Sbjct 544973 CCAAGTTCCTTTGC-----GATCTCAACGGATGAGGTCAAGGCAGCGTGGTAGATAGTCT 545027 Query 69026 CGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGA 69084 | ||||| | | ||||| | |||| ||||| || ||||||||| | | | Sbjct 545028 CAAAAATTTGGATGTTGAGGTGCTTG-GCTTCGGGAGAGTCGAATGGAAGACGAAGGGCC 545086 Query 69085 ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAA 69144 | ||| ||||| || | || ||||| || | | ||||||||| || | ||| | Sbjct 545087 AAAAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATT-GCT 545145 Query 69145 CTTTCA-GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGAC 69203 ||||| ||||| ||| |||||||| || || || ||||| || || | ||||| || Sbjct 545146 CTTTCTCGCTTCCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAAC 545205 Query 69204 TACTACTT---TAACCACGTCCTTTAGTTTGAGAAAATCAAA-------TCGTCCATCTA 69253 || |||| ||||| ||| || || | ||||| | || | ||| | Sbjct 545206 AACAACTTGGGTAACCTCGTGA---AGCTTTTGGAAATCGTAAGTGCCCTCATTCATGT- 545261 Query 69254 TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTG 69313 ||||||| | || || | ||| || | |||||| || ||||||| | | Sbjct 545262 TAACAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAG 545321 Query 69314 CATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGAT 69373 || | | ||||| || || | || | ||||| || || || | || | Sbjct 545322 AGTACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGT 545381 Query 69374 TACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAG 69433 ||||||| ||||| || || || |||||||| || || ||| | || || || | || | Sbjct 545382 TACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCG 545441 Query 69434 ATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCT- 69492 |||| |||||| | ||||| ||| || || ||||||| || ||| | Sbjct 545442 CCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTAAT---GGTCTTGCGACCCTTGCCAG 545498 Query 69493 --TTTTCATAT-TGTG-TATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 || || || | | || | |||| || || || || || |||| || |||| || Sbjct 545499 CCTTCTCGTAACTCTCATAGAGAGCC--TCAAACTCCTCGCCATAAACGTCTGCCAAACC 545556 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 ||||||||||| || ||||| | | ||| | | | | | ||| || ||||| || Sbjct 545557 CGGACATTCATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAA 545616 Query 69609 TAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTG 69667 ||||| |||||||| | || ||| |||||||| | | | | |||||| || || Sbjct 545617 GAGATCAGGAATCCACA-AGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCAT 545675 Query 69668 TAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 69727 ||| || ||||| || ||||| | || ||| | ||||||||| || || || | | Sbjct 545676 GATTCTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAG 545735 Query 69728 CCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGA 69787 | | | || || || || || || || || || | |||||||| ||||| || | | Sbjct 545736 CAAAAGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAA 545795 Query 69788 CTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTC 69847 ||| ||||| |||| ||| || || || || || || || || | ||||| || Sbjct 545796 CTCGGAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAG 545855 Query 69848 TTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 69907 | || || || | ||| ||||| || || || || | || ||||| | |||| Sbjct 545856 TAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCAC 545915 Query 69908 AACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAAC 69967 || ||||| ||||| || ||||| || || ||||| ||| |||||| | || || | Sbjct 545916 AAATCTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGC 545975 Query 69968 AGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGA 70027 | ||| | ||| ||| || |||||| || | ||| || || || || || | Sbjct 545976 ACGAAGAAAGTTGTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAA 546035 Query 70028 ACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATGA 70086 | | || | || | | ||||||||| ||||| || || ||||| ||| | ||| Sbjct 546036 AGTACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TGA 546094 Query 70087 ATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATT 70146 || || | ||| |||||||| | ||| || || || |||||| | ||| || | Sbjct 546095 ATACCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAGA 546154 Query 70147 TTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTC 70204 | ||||||||| || ||||| || || || || || | ||| ||||| |||| Sbjct 546155 CGTAGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCTC 546212 Query 70205 TTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAG 70264 ||||| | ||| |||| || |||| || | || | | |||| | || | || | Sbjct 546213 GATCGTAGACTATAGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTC--AAATG 546269 Query 70265 TAGGTGAGATAATC---GGAGATCGTTTACCATTTTTAGGATTAACATAGTTGA-ATAAA 70320 | | | ||||| |||||| || | |||||| | || || ||| |||| ||||| Sbjct 546270 TTTCTTTGCTAATCATAGGAGATGGTGTGCCATTTCTTGGGTTTGTATA-TTGATATAAA 546328 Query 70321 TCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATT 70380 || || || | | ||| |||| || |||| |||||| | || || | || || Sbjct 546329 TCGCGGATAACGTGAGAGAATTGTTTCTTGGTTTGCTTGTGGAGGTTAGAGACTGCAATA 546388 Query 70381 CTGGCTGCTAGAATAGCATAGTCAGGATGT 70410 | ||| |||||||||||||| || |||||| Sbjct 546389 CGGGCAGCTAGAATAGCATAATCGGGATGT 546418 >seq23 Length=743066 Score = 114 bits (126), Expect = 2e-20 Identities = 569/907 (63%), Gaps = 73/907 (8%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| || ||||| | |||||||| || || || ||||| |||| || ||||| Sbjct 463101 TTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTC 463160 Query 39386 TCCATGAAATCAAACGGATTAGTTG--CATTATAtttttttttAAATCCTAATTCTGAAA 39443 |||||||| || || || || | | | || | ||| | | | || | | | Sbjct 463161 TCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTA--CCCAGAGCGAGGA 463218 Query 39444 TCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGA 39503 | | ||| ||||| || || |||||| ||||| | | |||||||| | || Sbjct 463219 GGAGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGA 463278 Query 39504 GTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTA 39563 | | ||| |||||||| || | ||| |||| ||||| ||||| || || || || | Sbjct 463279 GAGCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGA 463338 Query 39564 TCGATGTTACTACCTCATCACTCGG-TGG---ATGCAATAAATGTTTAAACATTAAGCAG 39619 || || | | || || || ||| |||| | ||| || | | ||| Sbjct 463339 C--ATCTTG--AACGGATTGCTTGGATGGGCGATGCTTGAGATGGGAGAAGAGGAGGCAT 463394 Query 39620 GCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCA 39679 || |||||| || ||||| || || | || | |||||| || || ||||||||| Sbjct 463395 GCAAAGTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCA 463454 Query 39680 GGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATG 39739 | ||| ||||||||||| || ||||| || |||| || || ||||| || ||||| || Sbjct 463455 GCCATGAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATA 463514 Query 39740 CCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATC 39796 ||||| || || || || || || || | | | || | | || || | | ||| Sbjct 463515 CCTTCAACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATC 463574 Query 39797 CACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCA---------TTGTT------ 39841 || || ||||| || || |||||||| | ||||| | ||||| Sbjct 463575 CATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGGTTGTTAGATTG 463634 Query 39842 ------------------------------------TCTATAGCATTAAAGAGATAATGT 39865 || ||||| || || ||||| ||| Sbjct 463635 TACATCGCAGATGGGTGGGTTTATAACTTACTGGTATCGATAGCGTTGAATAGATA-TGT 463693 Query 39866 TTTTCATCACTAT-CTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGAT 39924 ||| | | | | || | |||||| || || | || || |||| || || || Sbjct 463694 CTTTTGTGCTTGTTCCTTGATATATGTGTCGATGAGAAGCGAGTATGTTTCAGAGTGAAT 463753 Query 39925 GTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGA 39984 ||| || ||| || || |||||||| || ||||||||||| | ||||| || || Sbjct 463754 GTTCTCCATCATGATTTGGAATCCGTAGAAGCATCTTGCTTCTGGGATTTGAACTTCACC 463813 Query 39985 ACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAA 40044 || |||| || |||| |||||||| || ||||| || || || || ||||| | Sbjct 463814 ACTGAATCGCTCAACCAAGTTTTCATTGACAATTCCGTCGGATGCAGCGAAGAATGCGAG 463873 Query 40045 TACATGTTTAATAAAATA---TTTTTCATC-GGGTGTCAATTTATTCCAGTCATTGATAT 40100 || || ||||| || | ||||| | ||| || |||||||| | | || Sbjct 463874 AACGTGGGAGATAAAGTAGCGCTCGTCATCATTGAGTC-TGTTGTTCCAGTCGTGTAGAT 463932 Query 40101 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGT 40160 | ||||| | ||| | ||||| || ||||| || || || |||||||| |||||||| | Sbjct 463933 CCTTTGACAGATCAATCTCTTCTGCGGTCCAGAAAGATGCTTCTGCCTTCTTGTACATCT 463992 Query 40161 TCCATAT 40167 ||| || Sbjct 463993 GCCAGAT 463999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686901535939440