Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 150 1e-31
seq23 91.5 1e-13
>seq1
Length=3180511
Score = 150 bits (166), Expect = 1e-31
Identities = 386/585 (66%), Gaps = 17/585 (3%)
Strand=Plus/Plus
Query 19243 ATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTT 19302
||||| || || || |||||| || ||||| || ||||| || | || ||| |
Sbjct 2576085 ATTGGTGGTTTAGATACAGAGTTCAGTGCTATCTTCCGAAGAGCTTTCGCTTCTCGTATC 2576144
Query 19303 TTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTAT 19362
||| | | | | ||| || ||||||| | | ||||| || || | |||| |
Sbjct 2576145 TTTCCCCCTGGCTTGATTGAAAAATTGGGCATTCAGCATGTGAAGGGTATTCTTCTTTTT 2576204
Query 19363 GGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---CA 19419
|| || |||||| |||||| || | ||||| | || || | || | || | ||
Sbjct 2576205 GGTCCTCCGGGTACTGGAAAGACGCTCATTGCCCGTCAAATTGGAAAGATGCTGAATTCA 2576264
Query 19420 AAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCG 19479
| | | || || | | || ||||||||| | | || ||||| || ||||||||
Sbjct 2576265 AGAGAGCCG---AAGGTCATCAACGGTCCTGAAGTACTGAACAAATACGTTGGTCAATCC 2576321
Query 19480 GAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG- 19538
||||||||| | ||| | ||||| ||||| ||| ||| | | || | |||| |
Sbjct 2576322 GAAGAAAATATCCGAAAGCTCTTTGCCGACGCCGAA-AAGGAGTACAAGGAAAAGGGAGA 2576380
Query 19539 CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG 19598
| | ||| | || || || || | ||||||||||| || | ||||| || |||||
Sbjct 2576381 CGAGAGTGGCCTTCATATCATCATTTTCGATGAATTGGATGCTGTATGTAAACAGAGAGG 2576440
Query 19599 ---------TTCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAA 19649
| ||||| || ||| || |||| ||||||||||||||| |||||||
Sbjct 2576441 AAGTGGTGCTGGTGGTGGAACTGGTGTTGGAGACAGTGTTGTCAATCAACTTTTGTCAAA 2576500
Query 19650 ATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709
| | ||||||||| |||| || ||||| ||| | ||||||| ||||| || | ||||
Sbjct 2576501 ACTTGACGGTGTTGACCAGCTCAATAACATTCTTCTTATTGGAATGACCAACCGTATGGA 2576560
Query 19710 ATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTT 19769
| || || ||| ||| | ||||| || || ||||| | | || |||||| | |
Sbjct 2576561 TATGATTGATGACGCTTTACTTCGACCTGGACGTTTGGAGGTTCATATGGAAATTTCCCT 2576620
Query 19770 ACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATC 19814
||||| ||| ||| | | ||||| | || || ||||| ||
Sbjct 2576621 GCCCGACGAAGCTGGCAGAGCACAAATTCTCAAGATTCATACTTC 2576665
>seq23
Length=743066
Score = 91.5 bits (100), Expect = 1e-13
Identities = 201/296 (68%), Gaps = 9/296 (3%)
Strand=Plus/Minus
Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789
|| ||||| |||||||| || ||| | || || || ||||| |||||||| ||||| ||
Sbjct 463999 ATCTGGCAGATGTACAAGAAGGCAGAAGCATCTTTCTGGACCGCAGAAGAGATTGATCTG 463940
Query 43790 ACTAAAGACTTAGCAC-ATTGGATTGCATTAAAACCAC--AAGAAAAAC---ATTTTATA 43843
| || || || ||| | |||| || | | || | || | | | |||||
Sbjct 463939 TCAAAGGATCTA-CACGACTGGAA--CAACAGACTCAATGATGACGAGCGCTACTTTATC 463883
Query 43844 TCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGT 43903
|| ||| | || || || ||||| |||||| || ||||||||||| ||||||
Sbjct 463882 TCCCACGTTCTCGCATTCTTCGCTGCATCCGACGGAATTGTCAATGAAAACTTGGTTGAG 463823
Query 43904 CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963
|| || ||||||||| | ||||||||| |||| || || || || |||||
Sbjct 463822 CGATTCAGTGGTGAAGTTCAAATCCCAGAAGCAAGATGCTTCTACGGATTCCAAATCATG 463763
Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019
|| || || ||||| || |||| ||| ||||| || || || || ||||| ||
Sbjct 463762 ATGGAGAACATTCACTCTGAAACATACTCGCTTCTCATCGACACATATATCAAGGA 463707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397451901980230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |