Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq29 277 2e-69 seq23 84.2 3e-11 >seq29 Length=608615 Score = 277 bits (306), Expect = 2e-69 Identities = 1168/1816 (64%), Gaps = 65/1816 (4%) Strand=Plus/Plus Query 110368 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTT 110427 ||||||||| |||||||| | || |||||| | | ||||||||| | || ||| Sbjct 544411 ATAGTACATTCCGGTCTTCAAACCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTT 544470 Query 110428 GGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCC 110487 | ||| || ||| || |||| | ||||||| |||| ||| |||||||| || Sbjct 544471 GCCCATTGTAGGATCTTTCATGTGAATGTTCATAGATTGAGATTGATCAATGAAAGCACC 544530 Query 110488 CCGTTGTGCCGCCATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACTGTGCGATAG 110545 || | || ||||| | || | | ||| | | ||||||||||| || || Sbjct 544531 ACGATCGGCAGCCATTTGAACAA--TTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAA 544588 Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605 || |||||| ||| |||| || | | |||||| |||||||| || || ||| | Sbjct 544589 AGGGCCTTGATGTCAGCTGGAATGTTGGGGATATTTTGGATGGATCCACCA----TCAGC 544644 Query 110606 A-TGAGA---TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAG 110661 | ||| | | |||||||| | ||||||||||| || | ||| || |||| || Sbjct 544645 AATGATACGGTTCTTCATATTATCAGACCAGAGACCCATATCGACGAGATCTTTGAGAAG 544704 Query 110662 GTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGT 110721 |||||| | || || || || || | | | ||||||||| | || Sbjct 544705 CCATGGGTTGACGACCTGGAATTCTCCAGCAAGAACACGACGCGAGTAGATGTTCGAAGT 544764 Query 110722 GTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGG 110781 || ||||| || ||||| || ||| | |||||| | ||| || |||||||| || Sbjct 544765 ATAAGGTTCGAAACATTCGTTGAAACCAAGGATTTGGGATGTGCTAGCAGTTGGCATAGG 544824 Query 110782 TGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCA 110841 || | | ||| ||| || | || | | |||||| || ||| | ||||| Sbjct 544825 CGCAACAAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATCGATTGCTTCAACGAGTCCCA 544884 Query 110842 GTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAG--CACCCCTTGGG 110897 || | | || | ||| | || |||||||||| | ||||| ||||| | | | Sbjct 544885 ATCCCACAAATCAG-TAGGTGTAACAC-CCCACATGTCGTATTGAAGTTCACCCTTAGAG 544942 Query 110898 ACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCA-CAGCTC 110956 || |||| ||| | | | ||||| || | ||| | | | || | ||| | | | Sbjct 544943 ACTGGGGA--ACCTTGATAAGTTTCGTATGGACCAAGTTCCTTTGCGATCTCAACGGATG 545000 Query 110957 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 111016 || ||| | ||||| || || || ||||| || | || | | ||||||||| Sbjct 545001 AGGTCAAGGCA-GCGTGGTAGATAGTCTCAAAAATTTGGATGTTGAGGTGCTTGGCTTCG 545059 Query 111017 TCTGAATCAAATG-----CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 111071 || || |||| || || | || |||| |||| || ||||||||||||| Sbjct 545060 GGAGAGTCGAATGGAAGACGAAGGGCCAAAAAAG-----CATCAGCAAGACCTTGAACAC 545114 Query 111072 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 111131 | | | | ||||||| ||| || | ||| ||||| ||| || ||| |||||| | | Sbjct 545115 CGACAGCGATAGGTCGGTGACGGAAATTGCTCTTTCTCGCTTCCTGAACCGGATAATAGT 545174 Query 111132 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 111191 | ||||||| | ||| | |||| | ||||| | || | || ||||| |||| Sbjct 545175 TGATGTCAATAATCTTGTTCAAATTTCTAACAACAACTTGGGTAACCTCGTGAAGCTTTT 545234 Query 111192 CATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGGGCGATTGATGCCA 111248 |||| |||||| ||| ||||| | ||| | |||| | ||||| || |||| Sbjct 545235 GGAAATCGTAAGTGCC---CTCATTCATGTTAACAAAAGTTGGCAAAGCGATAGAAGCCA 545291 Query 111249 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGG 111308 | || ||| ||| ||||||| | | |||||| | || || || || ||||||| Sbjct 545292 AGTTACAACAAGCAACCTCATCCGGCGCAGAGTACTCAACGATCTCCGTGCACAAGTTGG 545351 Query 111309 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGA 111368 | || ||| || || | |||||||||||||||||||||||||| ||||| ||||| | Sbjct 545352 AGCTGCGAATAGTTCCTAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAA 545411 Query 111369 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCG 111427 ||||| | || | || ||||| || || | | |||||||| | ||||| | | | | Sbjct 545412 GCATGAAAGGATTTCCTGTCTCGGTTTGCGCCTCGAGAATAGAGTACCAAAGCTTTTGAG 545471 Query 111428 GCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCA 111484 || ||||| ||| | || | || || |||||| | ||||| || ||| Sbjct 545472 CCT----TAATGGTCTTGCGACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCA 545527 Query 111485 AACTCCTCACCCACCGCGTCGGAGAGACCTGG---TGCCTTGTCTGGACAGAAAAGAGAC 111541 |||||||| || |||| | | ||| || | | ||| || || | ||| | | Sbjct 545528 AACTCCTCGCCATAAACGTCTGCCAAACCCGGACATTCATTG---GGGCACATAAGGGTC 545584 Query 111542 CATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAG 111601 || | || | ||||| ||||||||||| || || |||||||||| || | ||| Sbjct 545585 CAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAAGGCATAGAAG 545644 Query 111602 AGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 111661 ||||| | ||| | ||||| | ||| || || |||| ||||||||||| | Sbjct 545645 AGATCACGTGCGCGAACTTCTTCCTTACCATGATTCTTGCGTAGATCAAGGAACTCGAAA 545704 Query 111662 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC------CTTTCGACGCCCA 111715 | ||| || |||||||||||||| || || || | || || ||| | ||| Sbjct 545705 ACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCACCAGGGCGCTTGTTA---CCA 545761 Query 111716 GCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCT 111775 |||| | ||||| | || ||| ||| || || || ||||| |||| ||| || | Sbjct 545762 CCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATGGGAACAATGCCGTTG 545821 Query 111776 GATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATC 111835 || | || || || || ||| | | | || | | || |||| | Sbjct 545822 GAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCACGGATTCTGTGAATGTTGAGA 545881 Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895 |||||||| || || ||||||||| ||||| | | | ||| | || ||||| Sbjct 545882 CCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTGTCGTAAATACCA 545941 Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955 | ||| || || || || |||| |||||||| || | || | ||| ||| Sbjct 545942 TCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAGAAAGTTGTGCCTGTGGGGTA 546001 Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTA 112014 || ||| |||||| ||||| | || || | || ||| | | ||||| | ||| Sbjct 546002 CCCGCAGAGAAGAGTGTTGGGGAGGCATGTGT-AAAGTACTTGTTTGACATTAAATTGTA 546060 Query 112015 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACAT 112074 |||||| | | || ||||| || || ||||| || || | || || ||||||| ||| Sbjct 546061 TGTCTCAATGGCACTCTCAATATCATCACCGTGAATACCAACCGCAACACGCATGATCAT 546120 Query 112075 GTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGG 112133 | ||||| ||| | |||||||||| ||| |||| || | || |||||| | Sbjct 546121 TTGTTGTGGACGTTCTGCAACTTTGCCATCGAGACGTAGAAGGTATGATC-GCTCAAGAG 546179 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| ||| ||||| Sbjct 546180 TCTTGAAACCGAAGTA 546195 >seq23 Length=743066 Score = 84.2 bits (92), Expect = 3e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || |||||| || || || ||||| || ||||| || ||||| || || Sbjct 463395 GCAAAGTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCA 463454 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 | ||||||||| |||||||| | ||| | || | | ||| || ||||||||||| ||| Sbjct 463455 GCCATGAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATA 463514 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAAC 122838 || || || || || || | || |||| || || | | ||| | | || | Sbjct 463515 CCTTCAACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATC 463574 Query 122839 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 122879 ||||| | ||||| | |||||||||| || || || || Sbjct 463575 CATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 463615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628025358561600