Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq29 201 1e-46 seq23 116 5e-21 >seq29 Length=608615 Score = 201 bits (222), Expect = 1e-46 Identities = 1109/1744 (64%), Gaps = 55/1744 (3%) Strand=Plus/Plus Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902 |||||||| || ||||| | ||| |||||| || | |||||| || | | |||| Sbjct 544412 TAGTACATTCCGGTCTTCAAACCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTG 544471 Query 117903 GAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 117962 | || ||| || |||| | ||||||| ||| |||||||| ||||| || Sbjct 544472 CCCATTGTAGGATCTTTCATGTGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCA 544531 Query 117963 CGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAG 118019 ||||| || ||||| | || || || ||| || | |||||||| |||||| |||| Sbjct 544532 CGATCGGCAGCCATTTGAA-CA-ATTGTTCG-CTGGGAGATTTCCCAAACAGTCTTGTAA 544588 Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079 ||| ||| || ||| |||| || | ||||||||||||||||||||| | | Sbjct 544589 AGGGCCTTGATGTCAGCTGGAATGTTGGGGATATTTTGGATGGATCCACCATCAGCAATG 544648 Query 118080 ATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--AT 118137 || | | |||||||| | ||||||||||| || | |||||| | | || || Sbjct 544649 ATACGGTTCTTCATATTATCAGACCAGAGACCCATATCGACGAGATCTTTGAGAAGCCAT 544708 Query 118138 GCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGT 118197 | | |||| || || || || || || || | | ||||| || | || | Sbjct 544709 GGGT--TGACGACCTGGAATTCTCCAGCAAGAACACGACGCGAGTAGATGTTCGAAGTAT 544766 Query 118198 ATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTG 118257 | || || || || || ||| ||| | |||||||| |||| || || ||||| || | Sbjct 544767 AAGGTTCGAAACATTCGTTGAAACCAAGGATTTGGGATGTGCTAGCAGTTGGCATAGGCG 544826 Query 118258 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT 118317 | | || || ||| |||| || | || | | || || ||| | | |||||| | Sbjct 544827 CAACAAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATCGATTGCTTCAACGAGTCCCAAT 544886 Query 118318 CGTAGT--TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGC 118375 | | | || | || | | | |||||| || | || || ||| | || | Sbjct 544887 CCCACAAATCAG-TAGGTGTAACACC-CCACATGTCGTATTGAAGTTCACCCTTAGAGAC 544944 Query 118376 TGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGC 118432 ||| || || | | | || || ||||| || ||| || | || ||| | Sbjct 544945 TGGGGAACCTTGATAAGTTTCGTATGGACCAAGTTCCTTTGCGATCTCAACGGATGAGGT 545004 Query 118433 CTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTC 118492 | | ||| ||||| || || || |||||||| | || | |||||| ||| Sbjct 545005 C---AAGGCAGCGTGGTAGATAGTCTCAAAAATTTGGATGTTGAGGTGCTTGGCTTCGGG 545061 Query 118493 GGAATCAAACGCGAGTCG--GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 || || || | || || | | ||| || |||| || |||||||| ||||||| Sbjct 545062 AGAGTCGAATGGAAGACGAAGGGCCAAAAAAG--CATCAGCAAGACCTTGAACACCGACA 545119 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610 | || || || || | | ||| ||| | || || || |||||| | || | Sbjct 545120 GCGATAGGTCGGTGACGGAAATTGCTCTTTCTCGCTTCCTGAACCGGATAATAGTTGATG 545179 Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 118670 || |||| | | || | |||| | ||||| | || | || |||||||||| | || Sbjct 545180 TCAATAATCTTGTTCAAATTTCTAACAACAACTTGGGTAACCTCGTGAAGCTTTTGGAAA 545239 Query 118671 TCAAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTA 118727 || || ||| ||| ||||| | ||| | | || | ||||| || |||| ||| Sbjct 545240 TCGTAAGTGCC---CTCATTCATGTTAACAAAAGTTGGCAAAGCGATAGAAGCCAAGTTA 545296 Query 118728 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTC 118787 || || ||||||| ||| |||||| | || |||||||||||||| || || Sbjct 545297 CAACAAGCAACCTCATCCGGCGCAGAGTACTCAACGATCTCCGTGCACAAGTTGGAGCTG 545356 Query 118788 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATG 118847 ||| || || | ||||||||| || ||| |||| || ||||| |||||||||||| Sbjct 545357 CGAATAGTTCCTAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATG 545416 Query 118848 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGC 118907 | || | || ||||| ||||| | || |||||||| | ||| | | ||| | Sbjct 545417 AAAGGATTTCCTGTCTCGGTTTGCGCCTCGAGAATAGAGTACCAAAGCTTTTGAGC---C 545473 Query 118908 ACAGTGGCGTTG----GCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 118963 | ||| ||| || ||| ||| |||||| | ||||| || |||||||| Sbjct 545474 TTAATGGTCTTGCGACCCTTGCCAGCCTT-CTCGTAACTCTCATAGAGAGCCTCAAACTC 545532 Query 118964 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACC 119023 || || | |||| | || || | || ||||| | || | ||| | || Sbjct 545533 CTCGCCATAAACGTCTGCCAAACCCGGACATTCATTGGGGCACATAAGGGTCCAGTCTCC 545592 Query 119024 ACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG 119083 || ||||| |||||||||||||| || || ||||| | || |||||||||| || Sbjct 545593 GTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAAGGCATAGAAGAGATCACG 545652 Query 119084 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 119143 |||| ||||||| | || ||||| || | || | || || | | ||| || Sbjct 545653 TGCGCGAACTTCTTCCTTACCATGATTCTTGCGTAGATCAAGGAACTCGAAAACATCGGC 545712 Query 119144 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTT 119197 ||||| || || ||||| || || | | || | | || |||| | |||| Sbjct 545713 ATGCCATGGCTCAAGGTAAACAGCAAAAGCACC---AGGGCGCTTGTTACCACCTTGGTC 545769 Query 119198 TACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCC 119257 ||||| || || ||| ||| || || || ||||| |||| || || | ||| | || Sbjct 545770 AACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATGGGAACAATGCCGTTGGAATTTCC 545829 Query 119258 ATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATA 119315 || || || ||| ||| | || | | || | || ||| |||| | ||||||| Sbjct 545830 GTTGGTACCGGCGATATA-GGCAC-CAGTAGCACGGATTCTGTGAATGTTGAGACCAATA 545887 Query 119316 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATC 119375 || || || ||||||||| || || | | | | || |||| || |||||||| Sbjct 545888 CCACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTGTCGTAAATACCATCGATA 545947 Query 119376 GAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGC 119434 || | || | ||||||||||||| || | ||| ||||| || ||||| || Sbjct 545948 CTATCTTCTTTCATGTCGATGAGGAAGCACGAAGAAAGTTG-TGCCTGTGGGGTACCCGC 546006 Query 119435 GTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCT 119493 |||||| ||||| | || || | || ||| | | ||||| | ||| |||| Sbjct 546007 AGAGAAGAGTGTTGGGGAGGCATGTGT-AAAGTACTTGTTTGACATTAAATTGTATGTCT 546065 Query 119494 CCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATT 119553 | | | | ||| || || ||||||||||| | || || ||||| | ||| | || Sbjct 546066 CAATGGCACTCTCAATATCATCACCGTGAATACCAACCGCAACACGCATGATCATTTGTT 546125 Query 119554 GGGG 119557 | || Sbjct 546126 GTGG 546129 >seq23 Length=743066 Score = 116 bits (128), Expect = 5e-21 Identities = 337/513 (66%), Gaps = 8/513 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| | ||||||||||||||| ||||| || ||||| |||||||||||| Sbjct 463107 TAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTCTCCATG 463166 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || |||||||| || | | | ||| | || | | | |||||||| Sbjct 463167 AAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCAGAGCGAG--GAGGAGAC 463224 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 |||| | ||| |||| ||||| | ||| ||||||||| || | ||| || Sbjct 463225 GATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGAGCAC 463284 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 |||| || || || | || | | ||| || || |||||||| | || | | Sbjct 463285 ATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGACATCTT 463344 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025 ||| || | | || || | || | | |||||| ||||| || Sbjct 463345 GAACGGATTGCTTGGATGGGCGATGCTTGAGATGGGAGAAGAGGAGGCATGCAAAGTCAG 463404 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 |||||| || |||||||||||||||||||| || ||||| || || | |||||||| Sbjct 463405 TGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCCATGAGAC 463464 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||| | |||||| || | || || || |||||||| || || || || Sbjct 463465 CACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCTTCAACGG 463524 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT-TTGT-ATCAAACCACTTCAT 130203 ||||| || | |||||| | |||||| || | | | |||| | || ||| || | Sbjct 463525 CGGCGAAAGCGACGAGACGTTGAGCAAA--AGTAGAATTCTTGTCTTGAATCCATTTGAC 463582 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 ||||| | ||||| |||| ||| || || || Sbjct 463583 AGCCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 463615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618428660047760