Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq29 217 2e-51 seq23 123 3e-23 >seq29 Length=608615 Score = 217 bits (240), Expect = 2e-51 Identities = 1130/1773 (64%), Gaps = 65/1773 (4%) Strand=Plus/Minus Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTCTTGAT 104214 || || ||| |||| || |||||| || | || |||| ||| |||||||| | Sbjct 546195 TACTTCGGTTTCAAGACTCTTGAGC-GATCATACCTTCTACGTCTCGATGGCAAAGTTGC 546137 Query 104215 GGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGA 104274 ||| ||||| | ||| ||||||| || || | |||||||| || || || ||||| Sbjct 546136 AGAACGTCCACAACAAATGATCATGCGTGTTGCGGTTGGTATTCACGGTGATGATATTGA 546077 Query 104275 TTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAA 104333 || | | ||||||||| | ||||| | | ||| || | || || | |||| Sbjct 546076 GAGTGCCATTGAGACATACAATTTAATGTCAAACAAGTACTTT-ACACATGCCTCCCCAA 546018 Query 104334 CCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACA 104393 | |||||| ||| ||||| ||| | ||| | || |||||||| |||| || | Sbjct 546017 CACTCTTCTCTGCGGGTACCCCACAGGCACAACTTTCTTCGTGCTTCCTCATCGACATGA 545958 Query 104394 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 104453 | || || ||| | ||||| || | ||| | | | ||||| ||||||||| Sbjct 545957 AAGAAGATAGTATCGATGGTATTTACGACACTTTGAAGATTTGTGCCATGATCTCAAAGA 545898 Query 104454 GGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 104513 || || |||||||| | |||| || | | || | | | ||| | Sbjct 545897 ATGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGCCTATATCGCCG 545838 Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573 | || || || | || | || ||| |||| ||||| || || || ||| ||| || Sbjct 545837 GTACCAACGGAAATTCCAACGGCATTGTTCCCATGCTCCGAGTTTTCAACAACACCGCCA 545778 Query 104574 GCTATGTAAATCAAGCTGGGCGTCGAAAG------GGATCTATCGCAGTCTATCTTGAGC 104627 | ||||| | |||| ||| | ||| || || | || || || ||||||| Sbjct 545777 GATATGTTGACCAAGGTGG---TAACAAGCGCCCTGGTGCTTTTGCTGTTTACCTTGAGC 545721 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 ||||||| || ||| | | ||||||||||| | || || || ||| | || || | Sbjct 545720 CATGGCATGCCGATGTTTTCGAGTTCCTTGATCTACGCAAGAATCATGGTAAGGAAGAAG 545661 Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 || || |||||||||| || | |||||||| ||||||||||||||| | |||| Sbjct 545660 TTCGCGCACGTGATCTCTTCTATGCCTTGTGGATTCCTGATCTCTTCATGAAGCGTGTTG 545601 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCA---CCTGGTCTCTCCGATG 104804 | ||| || | ||| | || | || || ||| | | || ||| | | || | Sbjct 545600 AAAAGAACGGAGACTGGACCCTTATGTGCCC---CAATGAATGTCCGGGTTTGGCAGACG 545544 Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864 || ||||||||||| || || || | ||||| |||| | | | | | | Sbjct 545543 TTTATGGCGAGGAGTTTGAGGCTCTCTATGAGAGTTACGA-GAAGGCTGGCAAGGGTC-G 545486 Query 104865 C--GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 104922 | ||| | ||| | | ||| | |||||||| || | ||||||||||| || Sbjct 545485 CAAGACCATTAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAGGCGCAAACCGAGACAGG 545426 Query 104923 TACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 104982 | || | ||||||||||||||| || || ||| | |||||||| |||||||| | || Sbjct 545425 AAATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGTAACCAAAAGAACCTAGG 545366 Query 104983 TGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 105042 || || ||||| | || || || ||| | || | | | |||||| Sbjct 545365 AACTATTCGCAGCTCCAACTTGTGCACGGAGATCGTTGAGTACTCTGCGCCGGATGAGGT 545306 Query 105043 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC 105102 ||| |||||| | || || |||||| | || | | ||| | || | | | | Sbjct 545305 TGCTTGTTGTAACTTGGCTTCTATCGCTTTGCCAACTTTTGTTAA--CATGAATGAGGGC 545248 Query 105103 ATTT--GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 | || |||| |||| || ||||| ||||| || ||| | ||| | |||| Sbjct 545247 ACTTACGATTTCCAAAAGCTTCACGAGGTTACCCAAGTTGTTGTTAGAAATTTGAACAAG 545188 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 ||||||| | || | ||| || ||| || || | || ||| | | ||||| Sbjct 545187 ATTATTGACATCAACTATTATCCGGTTCAGGAAGCGAGAAAGAGCAATTTCCGTCACCGA 545128 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATG---TATTCATTCTTTGTCGCCACGCA 105277 || || | | |||||||||| ||||| || |||| | || ||| ||| | || Sbjct 545127 CCTATCGCTGTCGGTGTTCAAGGTCTTGCTGATGCTTTTTTGGCCCTTCGTCTTC---CA 545071 Query 105278 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCC 105337 || || || |||||| ||| | |||| | || |||||||| || || ||||| Sbjct 545070 TTCGACTCTCCCGAAGCCAAGCACCTCAACATCCAAATTTTTGAGACTATCTACCACGCT 545011 Query 105338 GCTCTTGAGGCGA---GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 105394 || ||||| | ||| ||| | ||| ||| ||||||||| ||||| | | | Sbjct 545010 GC-CTTGACCTCATCCGTT--GAGATCGCAAAGGAACTTGGTCCATACGAAACTTATCAA 544954 Query 105395 GGTTCTCCAGCTTCACAAGGGGTG--CTTCAATTTGATATGTGGGAAGGTGAGACCAAGC 105452 ||||| |||| || | | ||||| ||||||| || ||||||| || | ||| | | Sbjct 544953 GGTTCCCCAG--TCTCTAAGGGTGAACTTCAATACGACATGTGGG-GTGTTACACCTA-C 544898 Query 105453 T--TCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 105510 | | | || ||||| | | ||| || |||||| | | || | || ||| Sbjct 544897 TGATTTGTGGGATTGGGACTCGTTGAAGCAATCGATCAAGCAACACGGAATCCGCAACTC 544838 Query 105511 TCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 105570 |||||| | || || |||||||| || ||| | |||||| | ||| || ||||| Sbjct 544837 TCTCCTTGTTGCGCCTATGCCAACTGCTAGCACATCCCAAATCCTTGGTTTCAACGAATG 544778 Query 105571 CTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGAT 105630 || ||||| || || |||||||||| | | | || || ||||| || | | Sbjct 544777 TTTCGAACCTTATACTTCGAACATCTACTCGCGTCGTGTTCTTGCTGGAGAATTCCAGGT 544718 Query 105631 TGTCAACAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATG 105688 |||||| ||| || | | || ||| || || ||||||||||| | ||||| Sbjct 544717 CGTCAAC--CCATGGCTTCTCAAAGATCTCGTCGATATGGGTCTCTGGTCTGATAATATG 544660 Query 105689 AAGGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAA 105744 ||| | | ||| || ||| ||||| ||||| |||||||| | |||||| Sbjct 544659 AAGAACCGTATCATTGCTGA----TGGTGGATCCATCCAAAATATCCCCAACATTCCAGC 544604 Query 105745 TGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAAT---CAAGATGAAGGATGTCATTGA 105801 ||| || ||| | ||| || ||||||||||| | || ||| | | || | Sbjct 544603 TGACATCAAGGCCCTTTACAAGACTGTTTGGGAAATCTCCCAG-CGAACAA--TTGTTCA 544547 Query 105802 CATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGA 105861 ||||| || ||||||||| |||||||||||| |||| |||||| | |||| | Sbjct 544546 AATGGCTGCCGATCGTGGTGCTTTCATTGATCAATCTCAATCTATGAACATTCACATGAA 544487 Query 105862 AAGTCCAACGATGTCCAAGCTCTCTTCTATGCA 105894 | ||| || ||| |||| || | |||||||| Sbjct 544486 AGATCCTACAATGGGCAAGATCACATCTATGCA 544454 >seq23 Length=743066 Score = 123 bits (136), Expect = 3e-23 Identities = 164/225 (73%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTC 94790 |||||| || || | ||||| || || |||||| | || ||| || | |||| | || Sbjct 463616 AGTTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGACAAGAATTC 463557 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | | |||||| | || ||| |||| || || ||||| ||||| |||||||| || Sbjct 463556 ---TACTTTTGCTCAACGTCTCGTCGCTTTCGCCGCCGTTGAAGGTATTTTCTTCTCCGG 463500 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 |||||| | | || | ||||| |||||||| ||||||||| | || ||| ||||| Sbjct 463499 ATCCTTCGCCTCCATCTTCTGGCTTAAGAAGCGTGGTCTCATGGCTGGACTCACTTTCTC 463440 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||| || ||||| |||||||| || |||||| || ||||| Sbjct 463439 CAACGAACTCATCTCCCGTGACGAAGGCCTCCACACTGACTTTGC 463395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583254632017040