Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq29 161 1e-34 seq23 145 8e-30 >seq29 Length=608615 Score = 161 bits (178), Expect = 1e-34 Identities = 881/1393 (63%), Gaps = 48/1393 (3%) Strand=Plus/Plus Query 78526 CGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGG 78585 || ||| ||||||||| | || || || |||||| |||||| || | ||| ||| Sbjct 544742 CGACGCGAGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTGAAACCAAGGATTTGG 544801 Query 78586 GCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTG 78645 | || || || ||||| || || || || ||||| || || | || || |||| Sbjct 544802 GATGTGCTAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGGATTCCGTGTTGCTTG 544861 Query 78646 ATCTCGACCTTTAGGCCGTCCCAA------AATTCATTCGCCGCGATCCCCCACATGTCC 78699 ||| ||| | ||||||| || ||| | | | | ||||||||||| Sbjct 544862 ATCGATTGCTTCAACGAGTCCCAATCCCACAAATCAGTAGGTGTAACACCCCACATGTCG 544921 Query 78700 GGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGA-ACGTCTCGTAAGATCCCTCCTC 78758 |||||| ||||| || | || || || |||| | || ||||| | || || Sbjct 544922 TATTGAAGTTCACCCTTAGAGACTGGGGAACC-TTGATAAGTTTCGTATGGACCAAGTTC 544980 Query 78759 CTTGGCGAGTTC---GCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCC 78815 ||| |||| || | |||| | || ||| |||||||| | || ||| || || Sbjct 544981 CTTTGCGATCTCAACGGATGA---GGTCAAGGCAGCGTGGTAGATAGTCTCAAAAATTTG 545037 Query 78816 CTTGTTGAGCTCGCGCGCCTT-GGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACAT 78874 ||||||| | || | ||| || |||||| | ||| | || || || ||| Sbjct 545038 GATGTTGAGGT-GCTTGGCTTCGGGAGAGTCGAATGGAAGACGAAGGGCCAAAAAAGCAT 545096 Query 78875 CGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCG 78934 | || || || || || |||| |||||| |||||||| || | |||||||||| || Sbjct 545097 CAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATTGCTCTTTCTCGCTT 545156 Query 78935 CCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAG 78994 ||| ||| ||| |||| || || | ||||| || | || || | | Sbjct 545157 CCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAACAACAACTTGGG 545216 Query 78995 TCACCTCGTACAATTTGGCGAAATCAAAA-TGATTTCCTTTGATG--AAAGTCGGTAGGC 79051 | ||||||| | || |||||| || || || || ||| || || ||| Sbjct 545217 TAACCTCGTGAAGCTTTTGGAAATCGTAAGTGCCCTCATTC-ATGTTAACAAAAGTTGGC 545275 Query 79052 ACAGCGAT----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATT 79107 | |||||| |||| ||| || || ||| ||||| ||| ||| | ||| Sbjct 545276 AAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGAGTACTCAACGATC 545335 Query 79108 TCTGTGCACAAATTAGA----CGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTC 79163 || |||||||| || || ||| || || || | |||||| ||||| ||||||| Sbjct 545336 TCCGTGCACAAGTTGGAGCTGCGA----ATAGTTCCTAGGTTCTTTTGGTTACTCTTCTT 545391 Query 79164 GTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAAC 79223 ||| || || || ||||| |||| | || | || ||||| || || ||||| Sbjct 545392 GTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGCCTCGAGAAT 545451 Query 79224 GCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGA------- 79276 || ||| | | | ||| || ||||| ||||||| ||| | Sbjct 545452 AGAGTACCAAAGCTTTTGAGCCTT---AATGGTCTTG---CGACCCT-TGCCAGCCTTCT 545504 Query 79277 CGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACT 79336 |||| || || | | | || |||| ||||| || || | || ||||| || | Sbjct 545505 CGTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAACGTCTGCCAAACCCGGACATT 545564 Query 79337 CGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCG 79396 | | |||||||| ||| |||||| ||| ||| ||||| || ||||||||| || | Sbjct 545565 CATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATGAAGAGATCAG 545624 Query 79397 GGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGAC 79456 | ||||||| ||| |||||| || || || | || || | || || ||| | Sbjct 545625 GAATCCACAAGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCATGATTCTTGC 545684 Query 79457 GCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAAC 79516 | || || || || || | | ||||| ||||| ||||| || || | || || | || Sbjct 545685 GTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCAC 545744 Query 79517 CCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCA 79576 | ||||||| || || |||| || || | ||| |||||||||||||||||||||| Sbjct 545745 CAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCA 545804 Query 79577 TGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAA 79636 |||| || ||||||| || ||||| || ||| ||| | ||| | || || | Sbjct 545805 TGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCAGTAGCACGGA 545864 Query 79637 TGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTG 79695 | | | | | || || || || || |||| ||| ||||| || || ||| Sbjct 545865 T-TCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCACAAATCTTC 545923 Query 79696 AGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGAC 79755 | || ||||| || || ||||| || || ||||| ||| |||||||| || Sbjct 545924 AAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAGCACGAAGAA 545983 Query 79756 ATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTT 79815 | |||| | ||||| || |||||| || || | || || || ||| |||| Sbjct 545984 AGTTGTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTAAAGTACTTG 546043 Query 79816 TGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACC 79875 | ||| | || ||| ||||| || | | | | || || ||||| || || ||| Sbjct 546044 TTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCGTGAATACCAACC 546103 Query 79876 GCGACGCGCATGA 79888 || || ||||||| Sbjct 546104 GCAACACGCATGA 546116 Score = 156 bits (172), Expect = 5e-33 Identities = 221/311 (71%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 19394 GGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCC 19453 || || |||||| || |||| || || || |||||||| || ||||||||||| ||| Sbjct 545838 GGTACCAACGGAAATTCCAACGGCATTGTTCCCATGCTCCGAGTTTTCAACAACACCGCC 545779 Query 19454 AGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCA 19513 || || || |||| || || ||| ||| || | || || | ||||| |||||| Sbjct 545778 AGATATGTTGACCAAGGTGGTAACAAGCGCCCTGGTGCTTTTGCTGTTTACCTTGAGCCA 545719 Query 19514 TGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATG 19573 ||||| || || || | || ||||| || || ||| ||| || ||| | || || | Sbjct 545718 TGGCATGCCGATGTTTTCGAGTTCCTTGATCTACGCAAGAATCATGGTAAGGAAGAAGTT 545659 Query 19574 CGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAG 19633 ||| || || |||||| |||||||||||||| || || |||||| || ||||| Sbjct 545658 CGCGCACGTGATCTCTTCTATGCCTTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAA 545599 Query 19634 AAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTAC 19693 ||| ||| ||| ||| ||| |||||||| | ||||| || || | | ||||| || Sbjct 545598 AAGAACGGAGACTGGACCCTTATGTGCCCCAATGAATGTCCGGGTTTGGCAGACGTTTAT 545539 Query 19694 GGCGAGGCGTT 19704 ||||||| ||| Sbjct 545538 GGCGAGGAGTT 545528 >seq23 Length=743066 Score = 145 bits (160), Expect = 8e-30 Identities = 311/452 (69%), Gaps = 12/452 (3%) Strand=Plus/Minus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| ||||||||| | ||||| || ||| ||||| || |||||||| || || ||| Sbjct 463552 TTTGCTCAACGTCTCGTCGCTTTCGCCGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTC 463493 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 | || |||||||| || |||||||| |||||| | || || | |||||||||||| Sbjct 463492 GCCTCCATCTTCTGGCTTAAGAAGCGTGGTCTCATGGCTGGACTCACTTTCTCCAACGAA 463433 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCACACCTA 60152 || || ||||| ||||| |||||||| || |||||| || | | || || | || | Sbjct 463432 CTCATCTCCCGTGACGAAGGCCTCCACACTGACTTTGCA-TGCCTC-CTCTT--CTCCCA 463377 Query 60153 TTGGAAAAAT-GCCCTTCCAAGGATATTC--ACAAGAT-TGTTCAGTG-GGCTTGTGAAG 60207 | || || |||| |||||| | || | |||||| | ||| | ||| ||| Sbjct 463376 TCTCAAGCATCGCCCATCCAAGCA-ATCCGTTCAAGATGTCATCACCGAAGCTGTAGAAA 463318 Query 60208 TGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGGAG 60267 | ||| || || | || || || |||||||| ||| | || ||| || | Sbjct 463317 TCGAGCAAGAATTTTTGACCGAGGCTCTTCCATGTGCTCTCTTGGGAATGAACTCCACTC 463258 Query 60268 AAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGGAGAAGGAC 60327 |||| ||| ||||| |||| || || || || ||| | | | | ||| || ||| Sbjct 463257 TCATGAAGCAATACATCGAGTTCGTTGCTGATCGTCTCCT-CCTCGCTCTGGGTAACGAC 463199 Query 60328 CAA-TTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAG 60386 || | ||| | ||||| ||||||| ||||||| ||||| |||| || ||| Sbjct 463198 AAAGTCTACAGATCTGCCAACCCATTCGACTTCATGGAGAATATCTCCTTGGCTGGCAAG 463139 Query 60387 ACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 ||||||||||| |||||| | || || ||||| Sbjct 463138 ACCAACTTCTTCGAGAAGAGAGTTGGCGATTA 463107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548518999350240