Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq29 165 9e-36 >seq29 Length=608615 Score = 165 bits (182), Expect = 9e-36 Identities = 394/592 (67%), Gaps = 4/592 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || || | ||||| |||||||| || | ||| | |||||| ||| Sbjct 546116 TCATGCGTGTTGCGGTTGGTATTCACGGTGATGATATTGAGAGTGCCATTGAGACATACA 546057 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 | |||||| | ||||||||||| || ||| | ||||| || ||| || ||||| Sbjct 546056 ATTTAATGTCAAACAAGTACTTTACACATGCCTCCCCAACACTCTTCTCTGCGGGTACCC 545997 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || | || | || |||||||| | | ||||| || || ||||| || | Sbjct 545996 CACAGGCACAACTTTCTTCGTGCTTCCTCATCGACATGAAAGAAGATAGTATCGATGGTA 545937 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 | ||||| || | ||| |||||| ||||| ||| | |||||||| ||| || Sbjct 545936 TTTACGACACTTTGAAGATTTGTGCCATGATCTCAAAGAATGCCGGTGGTATTGGTCTCA 545877 Query 53433 AC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | | | ||| ||||||| | || | ||| || || ||||| || | Sbjct 545876 ACATTCACAGAA--TCCGTGCTACTGGTGCCTATATCGCCGGTACCAACGGAAATTCCAA 545819 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || || || || |||||||| || ||||||||||| ||| | || || |||| ||||| Sbjct 545818 CGGCATTGTTCCCATGCTCCGAGTTTTCAACAACACCGCCAGATATGTTGACCAAGGTGG 545759 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | |||||| || | || || | ||||| ||||| ||||| ||||| || | || Sbjct 545758 TAACAAGCGCCCTGGTGCTTTTGCTGTTTACCTTGAGCCATGGCATGCCGATGTTTTCGA 545699 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670 ||| || || || || |||||| ||| | ||||| | ||| ||||| || || Sbjct 545698 GTTCCTTGATCTACGCAAGAATCATGGTAAGGAAGAAGTTCGCGCACGTGATCTCTTCTA 545639 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 || |||||||||| || ||||||||| | || || ||| ||| || ||| ||| Sbjct 545638 TGCCTTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAAAAGAACGGAGACTGGACCCT 545579 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782 |||||||| || || || || || | | || || || ||||||||| Sbjct 545578 TATGTGCCCCAATGAATGTCCGGGTTTGGCAGACGTTTATGGCGAGGAGTTT 545527 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAG--AAGAGTCTGATTGACATGAG 55785 |||||| ||||| ||| || ||||| || | ||| || | | || || | ||| Sbjct 544598 TCAAGGCCCTTTACAAGACTGTTTGGGAAATCTCCCAGCGAACAAT-TG-TTCAAATGGC 544541 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||| ||||||||||| | ||| || || || || ||| ||||||| |||| | |||| Sbjct 544540 TGCCGATCGTGGTGCTTTCATTGATCAATCTCAATCTATGAACATTCACATGAAAGATCC 544481 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | || ||| |||| | | || ||||| ||| || ||||| ||| | ||||| || Sbjct 544480 TACAATGGGCAAGATCACATCTATGCATTTTGCTGGCTGGAAATTGGGTTTGAAGACCGG 544421 Query 55906 TATGTACTATCTGCGGACC 55924 ||||||||| |||| ||| Sbjct 544420 AATGTACTATTTGCGTACC 544402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547210213190800