Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq29 165 9e-36
>seq29
Length=608615
Score = 165 bits (182), Expect = 9e-36
Identities = 394/592 (67%), Gaps = 4/592 (1%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || || | ||||| |||||||| || | ||| | |||||| |||
Sbjct 546116 TCATGCGTGTTGCGGTTGGTATTCACGGTGATGATATTGAGAGTGCCATTGAGACATACA 546057
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
| |||||| | ||||||||||| || ||| | ||||| || ||| || |||||
Sbjct 546056 ATTTAATGTCAAACAAGTACTTTACACATGCCTCCCCAACACTCTTCTCTGCGGGTACCC 545997
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|| | || | || |||||||| | | ||||| || || ||||| || |
Sbjct 545996 CACAGGCACAACTTTCTTCGTGCTTCCTCATCGACATGAAAGAAGATAGTATCGATGGTA 545937
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
| ||||| || | ||| |||||| ||||| ||| | |||||||| ||| ||
Sbjct 545936 TTTACGACACTTTGAAGATTTGTGCCATGATCTCAAAGAATGCCGGTGGTATTGGTCTCA 545877
Query 53433 AC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| | | | ||| ||||||| | || | ||| || || ||||| || |
Sbjct 545876 ACATTCACAGAA--TCCGTGCTACTGGTGCCTATATCGCCGGTACCAACGGAAATTCCAA 545819
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| || || || |||||||| || ||||||||||| ||| | || || |||| |||||
Sbjct 545818 CGGCATTGTTCCCATGCTCCGAGTTTTCAACAACACCGCCAGATATGTTGACCAAGGTGG 545759
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
| |||||| || | || || | ||||| ||||| ||||| ||||| || | ||
Sbjct 545758 TAACAAGCGCCCTGGTGCTTTTGCTGTTTACCTTGAGCCATGGCATGCCGATGTTTTCGA 545699
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670
||| || || || || |||||| ||| | ||||| | ||| ||||| || ||
Sbjct 545698 GTTCCTTGATCTACGCAAGAATCATGGTAAGGAAGAAGTTCGCGCACGTGATCTCTTCTA 545639
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730
|| |||||||||| || ||||||||| | || || ||| ||| || ||| |||
Sbjct 545638 TGCCTTGTGGATTCCTGATCTCTTCATGAAGCGTGTTGAAAAGAACGGAGACTGGACCCT 545579
Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782
|||||||| || || || || || | | || || || |||||||||
Sbjct 545578 TATGTGCCCCAATGAATGTCCGGGTTTGGCAGACGTTTATGGCGAGGAGTTT 545527
Score = 84.2 bits (92), Expect = 2e-11
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAG--AAGAGTCTGATTGACATGAG 55785
|||||| ||||| ||| || ||||| || | ||| || | | || || | |||
Sbjct 544598 TCAAGGCCCTTTACAAGACTGTTTGGGAAATCTCCCAGCGAACAAT-TG-TTCAAATGGC 544541
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
||| ||||||||||| | ||| || || || || ||| ||||||| |||| | ||||
Sbjct 544540 TGCCGATCGTGGTGCTTTCATTGATCAATCTCAATCTATGAACATTCACATGAAAGATCC 544481
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| || ||| |||| | | || ||||| ||| || ||||| ||| | ||||| ||
Sbjct 544480 TACAATGGGCAAGATCACATCTATGCATTTTGCTGGCTGGAAATTGGGTTTGAAGACCGG 544421
Query 55906 TATGTACTATCTGCGGACC 55924
||||||||| |||| |||
Sbjct 544420 AATGTACTATTTGCGTACC 544402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547210213190800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |